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Assembly Name: biogeco2 v2.0

Name: nuclear pore

Term: GO:0005643  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1203 biogeco2 v2.0 632
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear pore complex protein 0.0
C-terminus
biog2_v2.0_unigene1740 biogeco2 v2.0 656
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene3613 biogeco2 v2.0 258
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
Blast2go: ran-binding protein 1 domain-containing protein 0.0
unknown
biog2_v2.0_unigene4258 biogeco2 v2.0 781
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gb|AAL32805.1| putative protein [Arabidopsis thaliana] gb|AAR23706.1| At4g27640 [Arabidopsis thaliana] gb|AEE85373.1| armadillo/beta-catenin-like repeat-containing protein [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable importin subunit beta-4-like 0.0
C-terminus
biog2_v2.0_unigene4831 biogeco2 v2.0 694
AutoFact: Ran-binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene5033 biogeco2 v2.0 1046
AutoFact: Ran-binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
Putative N-terminus
biog2_v2.0_unigene5963 biogeco2 v2.0 1565
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene8060 biogeco2 v2.0 545
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene8368 biogeco2 v2.0 333
AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
C-terminus
biog2_v2.0_unigene8794 biogeco2 v2.0 426
AutoFact: protein tornado 1 [Arabidopsis thaliana] dbj|BAB08571.1| unnamed protein product [Arabidopsis thaliana] gb|AED96644.1| protein tornado 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9717 biogeco2 v2.0 405
AutoFact: nucleoporin 50 protein [Arabidopsis thaliana] gb|AAG51549.1|AC037424_14 unknown protein; 23094-21772 [Arabidopsis thaliana] gb|AAK59765.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AAL15374.1| At1g52380/F19K6_4 [Arabidopsis thaliana] gb|AEE32797.1| nucl 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
Internal
biog2_v2.0_unigene11334 biogeco2 v2.0 472
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: importin subunit beta-1-like 0.0
Putative N-terminus
biog2_v2.0_unigene11442 biogeco2 v2.0 468
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene11726 biogeco2 v2.0 191
AutoFact: protein tornado 1 [Arabidopsis thaliana] dbj|BAB08571.1| unnamed protein product [Arabidopsis thaliana] gb|AED96644.1| protein tornado 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene11793 biogeco2 v2.0 400
AutoFact: Importin-alpha re-exporter, putative n=1 Tax=Ricinus communis RepID=B9SBF8_RICCO 0.0
FL-Next: sp=Exportin-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12096 biogeco2 v2.0 218
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
Internal
biog2_v2.0_unigene12426 biogeco2 v2.0 129
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene12795 biogeco2 v2.0 479
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear pore complex protein 0.0
Internal
biog2_v2.0_unigene14562 biogeco2 v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene14928 biogeco2 v2.0 196
AutoFact: Ran-binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB9_RICCO 0.0
Blast2go: ran-binding protein 1 domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain