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Assembly Name: biogeco2 v2.0

Name: nuclear envelope

Term: GO:0005635  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene5 biogeco2 v2.0 640
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
biog2_v2.0_unigene1031 biogeco2 v2.0 384
AutoFact: Bax inhibitor 1 n=9 Tax=Brassicaceae RepID=BI1_ARATH 0.0
Blast2go: bax inhibitor-1 0.0
unknown
biog2_v2.0_unigene1918 biogeco2 v2.0 536
AutoFact: pfam05955, Herpes_gp2, Equine herpesvirus glycoprotein gp2 6.0e-09
Blast2go: hydroxyproline-rich glycoprotein family protein 0.0
unknown
biog2_v2.0_unigene2416 biogeco2 v2.0 478
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
C-terminus
biog2_v2.0_unigene2953 biogeco2 v2.0 948
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoporin seh1-like 0.0
Complete
biog2_v2.0_unigene3031 biogeco2 v2.0 528
AutoFact: SAD1/UNC-84 domain protein 1 [Arabidopsis thaliana] dbj|BAB11521.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08289.1| AT5g04990/MUG13_15 [Arabidopsis thaliana] gb|AAM47476.1| AT5g04990/MUG13_15 [Arabidopsis thaliana] gb|AED90813.1| SAD1/UNC-84 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: sun domain-containing protein 1-like 0.0
C-terminus
biog2_v2.0_unigene3291 biogeco2 v2.0 625
AutoFact: Herpes_gp2 multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene4321 biogeco2 v2.0 1245
AutoFact: Bax inhibitor 1 n=1 Tax=Nicotiana tabacum RepID=Q93XB9_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bax inhibitor 1 0.0
Complete
biog2_v2.0_unigene4486 biogeco2 v2.0 617
AutoFact: nuclear transport factor 2, putative [Arabidopsis thaliana] 8.99634e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
biog2_v2.0_unigene5510 biogeco2 v2.0 843
AutoFact: Bax inhibitor 1 n=9 Tax=Brassicaceae RepID=BI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bax inhibitor-1 0.0
Complete
biog2_v2.0_unigene5525 biogeco2 v2.0 1029
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
biog2_v2.0_unigene8200 biogeco2 v2.0 224
AutoFact: RNA export 1 [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rae1-like protein 0.0
Internal
biog2_v2.0_unigene8203 biogeco2 v2.0 472
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
N-terminus
biog2_v2.0_unigene10128 biogeco2 v2.0 700
AutoFact: Nucleoporin 98 n=1 Tax=Daucus carota RepID=A9ZP15_DAUCA 0.0
FL-Next: tr=Transporter, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleoporin autopeptidase 0.0
C-terminus
biog2_v2.0_unigene10538 biogeco2 v2.0 568
AutoFact: WD-40 repeat protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoporin nup43 0.0
N-terminus
biog2_v2.0_unigene11343 biogeco2 v2.0 377
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
Internal
biog2_v2.0_unigene12344 biogeco2 v2.0 439
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoprotein tpr 0.0
Complete
biog2_v2.0_unigene12561 biogeco2 v2.0 436
AutoFact: Nucleoporin 98 n=1 Tax=Daucus carota RepID=A9ZP15_DAUCA 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleoporin autopeptidase 0.0
Putative C-terminus
biog2_v2.0_unigene13378 biogeco2 v2.0 261
AutoFact: WD-40 repeat protein family 0.0
FL-Next: tr=Os08g0266600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nucleoporin nup43 0.0
C-terminus
biog2_v2.0_unigene14823 biogeco2 v2.0 115
AutoFact: structural constituent of nuclear pore [Arabidopsis thaliana] gb|AAM91808.1| unknown protein [Arabidopsis thaliana] gb|AEC10495.1| structural constituent of nuclear pore [Arabidopsis thaliana] 0.0
Blast2go: nuclear pore glycoprotein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain