|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene402
|
biogeco2 v2.0
|
592
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• FL-Next: tr=Os12g0577100 protein; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene1157
|
biogeco2 v2.0
|
228
|
|
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene1467
|
biogeco2 v2.0
|
515
|
|
• AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana]
|
2.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss).
|
0.0
|
|
• Blast2go: symplekin
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene1612
|
biogeco2 v2.0
|
649
|
|
• AutoFact: Pre-mRNA splicing factor [Solanum tuberosum]
|
1.0e-06
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: uncharacterized protein loc100246698
|
5.7585e-19
|
|
Internal
|
|
biog2_v2.0_unigene4151
|
biogeco2 v2.0
|
769
|
|
• AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp43-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene7440
|
biogeco2 v2.0
|
623
|
|
• AutoFact: Ribonuclease III-like protein [Arabidopsis thaliana] gb|AAQ62445.1| At1g55140 [Arabidopsis thaliana] dbj|BAD42926.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33190.1| Ribonuclease III-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene8144
|
biogeco2 v2.0
|
736
|
|
• AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex exonuclease rrp42
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene8177
|
biogeco2 v2.0
|
493
|
|
• AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp41
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene9353
|
biogeco2 v2.0
|
413
|
|
• AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein Sb08g006250; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: exosome complex exonuclease rrp42
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene9852
|
biogeco2 v2.0
|
394
|
|
• AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor syf1-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene11972
|
biogeco2 v2.0
|
476
|
|
• AutoFact: RNA 3'-terminal phosphate cyclase-like protein [Arabidopsis thaliana] sp|Q9C578.1|RCL1_ARATH RecName: Full=Probable RNA 3'-terminal phosphate cyclase-like protein emb|CAC34503.1| RNA 3'-terminal phosphate cyclase-like protein [Arabidopsis thaliana] gb|AAN
|
0.0
|
|
• FL-Next: sp=Probable RNA 3'-terminal phosphate cyclase-like protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene12184
|
biogeco2 v2.0
|
301
|
|
• AutoFact: Hydroxyproline-rich glycoprotein-like protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH
|
2.0e-16
|
|
• Blast2go: hydroxyproline-rich glyco protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene12228
|
biogeco2 v2.0
|
268
|
|
• AutoFact: Peptidyl-tRNA hydrolase [Arabidopsis thaliana] sp|Q6NLS8.1|PTHM_ARATH RecName: Full=Peptidyl-tRNA hydrolase, mitochondrial; AltName: Full=M-PTH; AltName: Full=Mitochondrial CRS2-like protein; AltName: Full=Mitochondrial RNA splicing factor; Flags: Precurs
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chloroplastic group iib intron splicing facilitator crs2-b
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene12325
|
biogeco2 v2.0
|
364
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene12968
|
biogeco2 v2.0
|
539
|
|
• AutoFact: adenosine-deaminase family/editase family protein [Arabidopsis thaliana]
|
3.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: adenosine trna-specific 1
|
2.67521e-28
|
|
Internal
|
|
biog2_v2.0_unigene13559
|
biogeco2 v2.0
|
410
|
|
• AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula]
|
0.0
|
|
• Blast2go: exosome complex component rrp46
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene14557
|
biogeco2 v2.0
|
329
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene15066
|
biogeco2 v2.0
|
475
|
|
• AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp43-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene15117
|
biogeco2 v2.0
|
455
|
|
• AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: polyribonucleotide nucleotidyltransferase
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene17756
|
biogeco2 v2.0
|
226
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Coding
|
