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Assembly Name: biogeco2 v2.0

Name: protein transport

Term: GO:0015031  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene4891 biogeco2 v2.0 934
AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
biog2_v2.0_unigene4951 biogeco2 v2.0 1167
AutoFact: GTPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5d-like 0.0
Complete
biog2_v2.0_unigene5164 biogeco2 v2.0 1105
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Complete
biog2_v2.0_unigene5731 biogeco2 v2.0 607
AutoFact: GDP dissociation inhibitor 1-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdp dissociation inhibitor 0.0
N-terminus
biog2_v2.0_unigene5981 biogeco2 v2.0 843
AutoFact: Tim17 domain-containing protein n=3 Tax=Arabidopsis RepID=F4IMZ5_ARATH 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tim17 domain-containing protein 0.0
Complete
biog2_v2.0_unigene6410 biogeco2 v2.0 637
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9RDX1_PHYPA 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sec61 gamma subunit 2.04069e-28
Complete
biog2_v2.0_unigene7614 biogeco2 v2.0 653
AutoFact: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Arabidopsis thaliana] dbj|BAB02070.1| unnamed protein product [Arabidopsis thaliana] gb|ABD64061.1| At3g25120 [Arabidopsis thaliana] gb|ACI31307.1| At2g45250 [Arabid 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim17 tim22 tim23 family protein 0.0
C-terminus
biog2_v2.0_unigene7654 biogeco2 v2.0 440
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Putative Complete
biog2_v2.0_unigene7780 biogeco2 v2.0 433
AutoFact: mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] ref|NP_973621.1| mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] sp|Q9SP35.2|TIM17_ARATH RecName: Full=Mitochondrial import inner mem 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim17 0.0
C-terminus
biog2_v2.0_unigene7853 biogeco2 v2.0 666
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
FL-Next: sp=Cysteine protease ATG4A; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cysteine protease atg4-like 0.0
C-terminus
biog2_v2.0_unigene8534 biogeco2 v2.0 652
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
FL-Next: sp=Cysteine protease ATG4B; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cysteine protease atg4-like 0.0
Internal
biog2_v2.0_unigene8653 biogeco2 v2.0 480
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab11 -family small gtpase 0.0
N-terminus
biog2_v2.0_unigene9322 biogeco2 v2.0 294
AutoFact: Tim17/Tim22/Tim23 pre-protein translocase of the mitochondrial outer membrane domain-containing protein [Arabidopsis thaliana] gb|AAK95309.1|AF410323_1 AT4g26670/F10M23_10 [Arabidopsis thaliana] gb|AAM26699.1| AT4g26670/F10M23_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene10036 biogeco2 v2.0 415
AutoFact: ER lumen protein retaining receptor family protein [Arabidopsis thaliana] gb|AAM63347.1| putative ER lumen protein retaining receptor [Arabidopsis thaliana] dbj|BAF01240.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86975.1| ER lumen protein retain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: er lumen protein retaining receptor 0.0
C-terminus
biog2_v2.0_unigene10505 biogeco2 v2.0 580
AutoFact: Rab family GTPase n=2 Tax=Selaginella moellendorffii RepID=D8QUM7_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: member ras oncogene family 0.0
N-terminus
biog2_v2.0_unigene11183 biogeco2 v2.0 236
AutoFact: Rab family GTPase n=2 Tax=Selaginella moellendorffii RepID=D8QUM7_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: member ras oncogene family 0.0
C-terminus
biog2_v2.0_unigene12035 biogeco2 v2.0 383
AutoFact: Tim17/Tim22/Tim23 pre-protein translocase of the mitochondrial outer membrane domain-containing protein [Arabidopsis thaliana] gb|AAK95309.1|AF410323_1 AT4g26670/F10M23_10 [Arabidopsis thaliana] gb|AAM26699.1| AT4g26670/F10M23_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene12558 biogeco2 v2.0 431
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab11 -family small gtpase 0.0
unknown
biog2_v2.0_unigene12766 biogeco2 v2.0 218
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
Blast2go: rab11 -family small gtpase 0.0
Coding
biog2_v2.0_unigene14597 biogeco2 v2.0 124
AutoFact: GTPase [Glycine max] 0.0
Blast2go: ras-related protein raba5d-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain