Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: protein homodimerization activity

Term: GO:0042803  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene693 biogeco2 v2.0 854
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
biog2_v2.0_unigene889 biogeco2 v2.0 245
AutoFact: PREDICTED: alpha-type platelet-derived growth factor receptor-like n=1 Tax=Anolis carolinensis RepID=UPI0002039625 4.0e-21
Blast2go: alpha-type platelet-derived growth factor receptor 3.27233e-25
unknown
biog2_v2.0_unigene1022 biogeco2 v2.0 581
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
C-terminus
biog2_v2.0_unigene1105 biogeco2 v2.0 606
AutoFact: mRNA-decapping enzyme-like protein n=2 Tax=Arabidopsis RepID=DCP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
N-terminus
biog2_v2.0_unigene1123 biogeco2 v2.0 522
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
C-terminus
biog2_v2.0_unigene1249 biogeco2 v2.0 888
AutoFact: similar to yeast dcp1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
N-terminus
biog2_v2.0_unigene1459 biogeco2 v2.0 1181
AutoFact: Dcp1-like decapping family, putative [Oryza sativa Japonica Group] gb|ABA91529.1| mRNA decapping enzyme, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna-decapping enzyme-like protein 0.0
C-terminus
biog2_v2.0_unigene1553 biogeco2 v2.0 573
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus
biog2_v2.0_unigene2362 biogeco2 v2.0 535
AutoFact: Probable pyridoxal biosynthesis protein PDX1 n=2 Tax=Spermatophyta RepID=PDX1_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2451 biogeco2 v2.0 1420
AutoFact: DUF1423 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potyvirus vpg interacting protein 0.0
C-terminus
biog2_v2.0_unigene2636 biogeco2 v2.0 538
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
C-terminus
biog2_v2.0_unigene2950 biogeco2 v2.0 537
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
Blast2go: telomere repeat binding factor 1 0.0
unknown
biog2_v2.0_unigene3070 biogeco2 v2.0 625
AutoFact: DDT; Homeodomain-related n=1 Tax=Medicago truncatula RepID=A2Q504_MEDTR 2.0e-13
Blast2go: protein 4.19827e-13
unknown
biog2_v2.0_unigene3232 biogeco2 v2.0 525
AutoFact: Putative ketol-acid reductoisomerase n=1 Tax=Capsicum annuum RepID=B5LAT1_CAPAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ketol-acid reductoisomerase 0.0
N-terminus
biog2_v2.0_unigene3846 biogeco2 v2.0 317
AutoFact: Malic enzyme (Fragment) n=1 Tax=Vitis vinifera RepID=D7UC26_VITVI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: malic enzyme 0.0
C-terminus
biog2_v2.0_unigene3882 biogeco2 v2.0 648
AutoFact: translocon at inner membrane of chloroplasts 21 [Arabidopsis thaliana] gb|AAD26904.1| expressed protein [Arabidopsis thaliana] gb|AAL09751.1| At2g15290/F27O10.6 [Arabidopsis thaliana] gb|AAL38691.1| unknown protein [Arabidopsis thaliana] gb|AAM67464.1| un 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translocon at inner membrane of chloroplasts 21 0.0
N-terminus
biog2_v2.0_unigene3971 biogeco2 v2.0 212
AutoFact: MYB transcription factor MYB107 [Glycine max] 3.0e-34
Blast2go: telomere repeat binding factor 1 0.0
Coding
biog2_v2.0_unigene4284 biogeco2 v2.0 456
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene4453 biogeco2 v2.0 1123
AutoFact: Serine/threonine-protein kinase bri1, putative n=1 Tax=Ricinus communis RepID=B9T4K2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid receptor 0.0
C-terminus
biog2_v2.0_unigene4595 biogeco2 v2.0 935
AutoFact: Malic enzyme (Fragment) n=1 Tax=Vitis vinifera RepID=D7UC26_VITVI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: malic enzyme 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain