|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene656
|
biogeco2 v2.0
|
429
|
|
• AutoFact: SRI domain containing protein
|
2.0e-05
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger ccch domain-containing protein
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene1924
|
biogeco2 v2.0
|
1585
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene2227
|
biogeco2 v2.0
|
1280
|
|
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal l1 domain-containing protein 1-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene3110
|
biogeco2 v2.0
|
526
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3593
|
biogeco2 v2.0
|
352
|
|
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group]
|
2.0e-32
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: transcription initiation factor iif subunit alpha
|
7.42688e-44
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene4764
|
biogeco2 v2.0
|
497
|
|
• AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Transcription initiation factor, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: transcription initiation
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene10692
|
biogeco2 v2.0
|
433
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene10848
|
biogeco2 v2.0
|
345
|
|
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus]
|
3.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein Sb08g019140; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene11146
|
biogeco2 v2.0
|
469
|
|
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus]
|
3.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene11964
|
biogeco2 v2.0
|
373
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene12598
|
biogeco2 v2.0
|
469
|
|
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML
|
0.0
|
|
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna-directed rna polymerase i subunit rpa1-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene12951
|
biogeco2 v2.0
|
266
|
|
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q5D868_SPIOL
|
9.94922e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein dcl
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene13776
|
biogeco2 v2.0
|
197
|
|
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q5D868_SPIOL
|
9.94922e-44
|
|
• Blast2go: protein dcl
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene14847
|
biogeco2 v2.0
|
525
|
|
• AutoFact: SRI domain containing protein
|
2.0e-05
|
|
• Blast2go: zinc finger ccch domain-containing protein
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene18610
|
biogeco2 v2.0
|
1232
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene19425
|
biogeco2 v2.0
|
92
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
unknown
|
