Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: photomorphogenesis

Term: GO:0009640  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene183 biogeco2 v2.0 955
AutoFact: putative COP9 complex subunit 6 [Oryza sativa Japonica Group] emb|CAJ81251.1| COP9 signalosome subunit 6 [Oryza sativa] dbj|BAG86632.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE68946.1| hypothetical protein OsJ_27828 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cop9 signalosome complex subunit 6a 0.0
C-terminus
biog2_v2.0_unigene223 biogeco2 v2.0 358
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
Internal
biog2_v2.0_unigene367 biogeco2 v2.0 359
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
unknown
biog2_v2.0_unigene372 biogeco2 v2.0 453
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative C-terminus
biog2_v2.0_unigene483 biogeco2 v2.0 516
AutoFact: Rab family protein 3.0e-13
FL-Next: sp=Uncharacterized GTP-binding protein At5g64813; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized gtp-binding protein at5g64813 1.74073e-19
C-terminus
biog2_v2.0_unigene952 biogeco2 v2.0 605
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog2_v2.0_unigene1111 biogeco2 v2.0 342
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
N-terminus
biog2_v2.0_unigene1671 biogeco2 v2.0 1041
AutoFact: Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SGD6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 0.0
Complete
biog2_v2.0_unigene2196 biogeco2 v2.0 381
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
C-terminus
biog2_v2.0_unigene2496 biogeco2 v2.0 591
AutoFact: serine palmitpoyltransferase subunit2 [Nicotiana tabacum] gb|ABW97709.1| serine palmitoyltransferase long chain base subunit [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine palmitoyltransferase 0.0
C-terminus
biog2_v2.0_unigene2901 biogeco2 v2.0 419
AutoFact: serine palmitpoyltransferase subunit2 [Nicotiana tabacum] gb|ABW97709.1| serine palmitoyltransferase long chain base subunit [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine palmitoyltransferase 0.0
Internal
biog2_v2.0_unigene3672 biogeco2 v2.0 736
AutoFact: serine palmitpoyltransferase subunit2 [Nicotiana tabacum] gb|ABW97709.1| serine palmitoyltransferase long chain base subunit [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine palmitoyltransferase 0.0
N-terminus
biog2_v2.0_unigene4413 biogeco2 v2.0 262
AutoFact: COP9 signalosome complex subunit 4 [Arabidopsis thaliana] sp|Q8L5U0.2|CSN4_ARATH RecName: Full=COP9 signalosome complex subunit 4; Short=AtS4; Short=Signalosome subunit 4; AltName: Full=Constitutive photomorphogenesis protein 8; AltName: Full=Protein FUSC 0.0
Blast2go: cop9 signalosome complex subunit 4 0.0
unknown
biog2_v2.0_unigene4689 biogeco2 v2.0 795
AutoFact: COP9 signalosome complex subunit 4 [Arabidopsis thaliana] sp|Q8L5U0.2|CSN4_ARATH RecName: Full=COP9 signalosome complex subunit 4; Short=AtS4; Short=Signalosome subunit 4; AltName: Full=Constitutive photomorphogenesis protein 8; AltName: Full=Protein FUSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cop9 signalosome complex subunit 4 0.0
C-terminus
biog2_v2.0_unigene5074 biogeco2 v2.0 716
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
C-terminus
biog2_v2.0_unigene5464 biogeco2 v2.0 1409
AutoFact: Eukaryotic translation initiation factor 3 subunit 6 n=3 Tax=Zea mays RepID=B6TRV3_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene7056 biogeco2 v2.0 676
AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 0.0
FL-Next: sp=Anthranilate synthase component I-1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anthranilate synthase alpha subunit 0.0
C-terminus
biog2_v2.0_unigene7132 biogeco2 v2.0 525
AutoFact: Eukaryotic translation initiation factor 3 subunit 6 n=3 Tax=Zea mays RepID=B6TRV3_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene7270 biogeco2 v2.0 531
AutoFact: COP9 signalosome complex subunit 4 [Arabidopsis thaliana] sp|Q8L5U0.2|CSN4_ARATH RecName: Full=COP9 signalosome complex subunit 4; Short=AtS4; Short=Signalosome subunit 4; AltName: Full=Constitutive photomorphogenesis protein 8; AltName: Full=Protein FUSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cop9 signalosome complex subunit 4 0.0
N-terminus
biog2_v2.0_unigene7604 biogeco2 v2.0 621
AutoFact: Mini zinc finger 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK08_WELMI 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mini zinc finger 1 8.51857e-37
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain