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Assembly Name: biogeco2 v2.0

Name: tRNA processing

Term: GO:0008033  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene531 biogeco2 v2.0 667
AutoFact: geranylgeranyl hydrogenase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: geranylgeranyl reductase 0.0
N-terminus
biog2_v2.0_unigene2206 biogeco2 v2.0 651
AutoFact: geranylgeranyl hydrogenase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: geranylgeranyl reductase 0.0
C-terminus
biog2_v2.0_unigene3089 biogeco2 v2.0 337
AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoprotease m22 family protein 0.0
N-terminus
biog2_v2.0_unigene3795 biogeco2 v2.0 466
AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gmp synthase 0.0
C-terminus
biog2_v2.0_unigene7562 biogeco2 v2.0 789
AutoFact: glycoprotease M22 family protein [Arabidopsis thaliana] ref|NP_974593.1| glycoprotease M22 family protein [Arabidopsis thaliana] emb|CAA16557.1| glycoprotein endopeptidase - like protein [Arabidopsis thaliana] emb|CAB79227.1| glycoprotein endopeptidase-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoprotease m22 family protein 0.0
Internal
biog2_v2.0_unigene9097 biogeco2 v2.0 419
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SE49_RICCO 0.0
FL-Next: sp=tRNA dimethylallyltransferase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna dimethylallyltransferase 9 0.0
C-terminus
biog2_v2.0_unigene9443 biogeco2 v2.0 548
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
Putative Complete
biog2_v2.0_unigene9660 biogeco2 v2.0 439
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
biog2_v2.0_unigene14914 biogeco2 v2.0 398
AutoFact: tRNA-dihydrouridine synthase 3-like n=3 Tax=Arabidopsis RepID=DUS3L_ARATH 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna-dihydrouridine synthase 3-like protein 0.0
C-terminus
biog2_v2.0_unigene15752 biogeco2 v2.0 582
AutoFact: putative ribonuclease P/MRP protein subunit POP5 [Arabidopsis thaliana] sp|Q6AWV1.1|POP5_ARATH RecName: Full=Probable ribonuclease P/MRP protein subunit POP5; AltName: Full=Protein EMBRYO DEFECTIVE 1687 gb|AAT85743.1| At1g04635 [Arabidopsis thaliana] gb|A 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene16247 biogeco2 v2.0 411
AutoFact: tRNA-dihydrouridine synthase n=1 Tax=Ricinus communis RepID=B9SSD6_RICCO 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-dihydrouridine synthase 2 0.0
Internal
biog2_v2.0_unigene16683 biogeco2 v2.0 348
AutoFact: RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H50 emb|CAB38623.1| putative protein [Arabidopsis thaliana] emb|CAB80552.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna-dihydrouridine synthase 3-like 0.0
Internal
biog2_v2.0_unigene17009 biogeco2 v2.0 417
AutoFact: phenylalanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q94K73.1|SYFM_ARATH RecName: Full=Phenylalanyl-tRNA synthetase, chloroplastic/mitochondrial; AltName: Full=Phenylalanine--tRNA ligase; Short=PheRS; Flags: Precursor gb|AAK44062.1|AF370247_1 putative p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phenylalanyl-trna chloroplastic mitochondrial-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain