Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: rRNA processing

Term: GO:0006364  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene13133 biogeco2 v2.0 243
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog2_v2.0_unigene13163 biogeco2 v2.0 314
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pescadillo-like protein 0.0
N-terminus
biog2_v2.0_unigene14313 biogeco2 v2.0 511
AutoFact: DUF947 domain containing protein 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
biog2_v2.0_unigene14625 biogeco2 v2.0 525
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal rna large subunit methyltransferase n 0.0
N-terminus
biog2_v2.0_unigene14711 biogeco2 v2.0 321
AutoFact: haloacid dehalogenase-like hydrolase-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein At2g25870; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: haloacid dehalogenase-like hydrolase-like 0.0
C-terminus
biog2_v2.0_unigene16441 biogeco2 v2.0 450
AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat membrane protein 0.0
Internal
biog2_v2.0_unigene17394 biogeco2 v2.0 217
AutoFact: putative U3 small nucleolar RNA-associated protein 11 [Arabidopsis thaliana] sp|Q9M223.1|UTP11_ARATH RecName: Full=Probable U3 small nucleolar RNA-associated protein 11; Short=U3 snoRNA-associated protein 11 emb|CAB81822.1| putative protein [Arabidopsis t 0.0
Blast2go: u3 small nucleolar rna-associated protein 11 0.0
unknown
biog2_v2.0_unigene17400 biogeco2 v2.0 185
AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
Internal
biog2_v2.0_unigene17985 biogeco2 v2.0 258
AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
N-terminus
biog2_v2.0_unigene19295 biogeco2 v2.0 323
AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 2.0e-08
Blast2go: u3 ribonucleoprotein family protein 5.55209e-10
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain