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Assembly Name: biogeco2 v2.0

Name: jasmonic acid mediated signaling pathway

Term: GO:0009867  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene693 biogeco2 v2.0 854
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
biog2_v2.0_unigene841 biogeco2 v2.0 1002
AutoFact: Stigma-specific Stig1 family protein [Arabidopsis thaliana] gb|AAF87867.1|AC022520_11 Unknown protein [Arabidopsis thaliana] dbj|BAD43803.1| unknown protein [Arabidopsis thaliana] gb|AEE32894.1| Stigma-specific Stig1 family protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 9.39744e-37
Complete
biog2_v2.0_unigene1420 biogeco2 v2.0 493
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog2_v2.0_unigene2165 biogeco2 v2.0 576
AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Picea sitchensis RepID=A9NU97_PICSI 0.0
FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dimethyl-8-ribityllumazine synthase precursor 0.0
Putative C-terminus
biog2_v2.0_unigene3015 biogeco2 v2.0 747
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene8135 biogeco2 v2.0 450
AutoFact: Unassigned protein
Blast2go: protein 0.0
Putative coding
biog2_v2.0_unigene9975 biogeco2 v2.0 458
AutoFact: Wounding-induced ribonuclease gene protein n=1 Tax=Zinnia violacea RepID=Q41723_ZINEL 0.0
FL-Next: sp=Ribonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease t2 0.0
Internal
biog2_v2.0_unigene10289 biogeco2 v2.0 536
AutoFact: RNase PD2 (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLS1_PRUDU 0.0
FL-Next: sp=Ribonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease 1 0.0
Putative N-terminus
biog2_v2.0_unigene11345 biogeco2 v2.0 171
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
Blast2go: transcription factor 0.0
unknown
biog2_v2.0_unigene12929 biogeco2 v2.0 90
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 4.0e-21
Blast2go: protein topless 1.06327e-29
unknown
biog2_v2.0_unigene12999 biogeco2 v2.0 173
AutoFact: RNase PD2 (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLS1_PRUDU 0.0
FL-Next: sp=Ribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease 1 0.0
Internal
biog2_v2.0_unigene15163 biogeco2 v2.0 567
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 0.0
Internal
biog2_v2.0_unigene15446 biogeco2 v2.0 245
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
unknown
biog2_v2.0_unigene15890 biogeco2 v2.0 542
AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coronitine insensitive 1 0.0
C-terminus
biog2_v2.0_unigene15970 biogeco2 v2.0 407
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Putative coding
biog2_v2.0_unigene16245 biogeco2 v2.0 397
AutoFact: RNase PD2 (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLS1_PRUDU 0.0
FL-Next: sp=Ribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease 1 0.0
Internal
biog2_v2.0_unigene16251 biogeco2 v2.0 654
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal
biog2_v2.0_unigene16554 biogeco2 v2.0 325
AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
Blast2go: coronitine insensitive 1 0.0
unknown
biog2_v2.0_unigene17644 biogeco2 v2.0 341
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain