Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: structural constituent of ribosome

Term: GO:0003735  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene15553 biogeco2 v2.0 796
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
biog2_v2.0_unigene15904 biogeco2 v2.0 327
AutoFact: Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI 0.0
FL-Next: tr=Ribosomal protein S3; Cathaya argyrophylla. Mitochondrion. 0.0
Blast2go: ribosomal protein s3 0.0
Internal
biog2_v2.0_unigene15922 biogeco2 v2.0 203
AutoFact: Ribosomal protein S3 n=8 Tax=Pinaceae RepID=D2DWK4_9CONI 0.0
FL-Next: tr=Ribosomal protein S3; Abies holophylla (Neddle fir) (Manchurian fir). Mitochondrion. 0.0
Blast2go: ribosomal protein s3 0.0
C-terminus
biog2_v2.0_unigene15975 biogeco2 v2.0 265
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog2_v2.0_unigene16111 biogeco2 v2.0 405
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJX0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of 0.0
Internal
biog2_v2.0_unigene17619 biogeco2 v2.0 557
AutoFact: 50S ribosomal protein L3-2 [Arabidopsis thaliana] sp|Q9LRN8.1|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags: Precursor dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gb|AEE75957.1| 50S ribosomal protein L3-2 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l3-2 0.0
Putative N-terminus
biog2_v2.0_unigene17622 biogeco2 v2.0 590
AutoFact: 50S ribosomal protein L21 n=4 Tax=Andropogoneae RepID=B6TJJ8_MAIZE 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l21 0.0
Internal
biog2_v2.0_unigene17874 biogeco2 v2.0 940
AutoFact: 40S ribosomal protein S15a-1 n=32 Tax=Tracheophyta RepID=R15A1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene18175 biogeco2 v2.0 394
AutoFact: Magnesium transporter CorA-like-like protein [Arabidopsis thaliana] gb|AAL85000.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AAO11621.1| At2g04305/T23O15.7 [Arabidopsis thaliana] gb|AEC05820.1| Magnesium transporter CorA-like-like protein [Arabidopsis 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene18422 biogeco2 v2.0 375
AutoFact: RecName: Full=50S ribosomal protein L5, chloroplastic pdb|3BBO|H Chain H, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l5 0.0
Internal
biog2_v2.0_unigene19483 biogeco2 v2.0 657
AutoFact: RecName: Full=40S ribosomal protein S23; AltName: Full=S12 gb|AAA79921.1| putative 40S ribosomal protein s12 [Fragaria x ananassa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s23 0.0
Complete
biog2_v2.0_unigene19551 biogeco2 v2.0 670
AutoFact: 60S ribosomal protein L26-2 n=2 Tax=Arabidopsis RepID=RL262_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l26 0.0
Complete
biog2_v2.0_unigene19826 biogeco2 v2.0 97
AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 2.0e-33
Blast2go: ribosomal protein s27 1.4013e-44
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain