Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene474 biogeco2 v2.0 1233
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
C-terminus
biog2_v2.0_unigene490 biogeco2 v2.0 509
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
Blast2go: ribosomal protein s5 family protein 0.0
unknown
biog2_v2.0_unigene1114 biogeco2 v2.0 580
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb09g002780; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ribosomal protein l31 1.22904e-18
Complete
biog2_v2.0_unigene1157 biogeco2 v2.0 228
AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene1975 biogeco2 v2.0 860
AutoFact: 50S ribosomal protein L19-1 [Arabidopsis thaliana] sp|Q8W463.1|RK191_ARATH RecName: Full=50S ribosomal protein L19-1, chloroplastic; Flags: Precursor gb|AAL32899.1| Unknown protein [Arabidopsis thaliana] gb|AAM10187.1| unknown protein [Arabidopsis thalian 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l19 0.0
Complete
biog2_v2.0_unigene2569 biogeco2 v2.0 996
AutoFact: Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ricinus communis RepID=B9RK90_RICCO 0.0
FL-Next: sp=Glycylpeptide N-tetradecanoyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glycylpeptide n-tetradecanoyltransferase 1 0.0
Internal
biog2_v2.0_unigene2653 biogeco2 v2.0 1439
AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene3867 biogeco2 v2.0 862
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog2_v2.0_unigene4236 biogeco2 v2.0 509
AutoFact: Ribosomal L18p/L5e family protein [Arabidopsis thaliana] dbj|BAB01882.1| unnamed protein product [Arabidopsis thaliana] gb|AAM63600.1| unknown [Arabidopsis thaliana] gb|AAN41334.1| unknown protein [Arabidopsis thaliana] dbj|BAH19862.1| AT3G20230 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene4549 biogeco2 v2.0 826
AutoFact: 50S ribosomal protein L20 n=1 Tax=Picea sitchensis RepID=A9NPE5_PICSI 0.0
FL-Next: sp=50S ribosomal protein L20; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l20 0.0
Complete
biog2_v2.0_unigene4603 biogeco2 v2.0 733
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=D5ADT3_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene4730 biogeco2 v2.0 678
AutoFact: 50S ribosomal protein L3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l3 0.0
N-terminus
biog2_v2.0_unigene5401 biogeco2 v2.0 1004
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog2_v2.0_unigene5804 biogeco2 v2.0 754
AutoFact: 30S ribosomal protein S17, putative n=1 Tax=Ricinus communis RepID=B9RQK5_RICCO 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s17 0.0
Complete
biog2_v2.0_unigene7034 biogeco2 v2.0 468
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=A9NKM1_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l35 0.0
N-terminus
biog2_v2.0_unigene7600 biogeco2 v2.0 264
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
C-terminus
biog2_v2.0_unigene7969 biogeco2 v2.0 394
AutoFact: 50S ribosomal protein L3 [Arabidopsis thaliana] 0.0
Blast2go: 50s ribosomal protein l3 0.0
unknown
biog2_v2.0_unigene8011 biogeco2 v2.0 303
AutoFact: Chain U, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. gb|AAL35983.1|AF104396_1 ribosome-like protein [Cucumis sativus] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene8048 biogeco2 v2.0 570
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR 0.0
Blast2go: uncharacterized amino acid permease -like 0.0
Putative coding
biog2_v2.0_unigene8140 biogeco2 v2.0 408
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJX0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain