Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: primary metabolic process

Term: GO:0044238  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9268 biogeco2 v2.0 204
AutoFact: Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI 0.0
FL-Next: sp=Lysyl-tRNA synthetase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysyl-trna synthetase 0.0
Internal
biog2_v2.0_unigene9948 biogeco2 v2.0 310
AutoFact: [C] COG0584 Glycerophosphoryl diester phosphodiesterase 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene10408 biogeco2 v2.0 631
AutoFact: SKP1-interacting partner 15 n=2 Tax=Arabidopsis RepID=SKI15_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
biog2_v2.0_unigene10692 biogeco2 v2.0 433
AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor transcription initiation factor 0.0
Internal
biog2_v2.0_unigene10928 biogeco2 v2.0 141
AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
biog2_v2.0_unigene11142 biogeco2 v2.0 334
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAM19803.1| At1g74320/F1O17_1 [Arabidopsis thaliana] gb|AAM98234.1| putative choline kinase [Arabidopsis thaliana] gb|AAP42750.1| At1g74320 [Arabidopsis thaliana] gb|AEE35577.1| protein ki 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: choline ethanolamine kinase 0.0
Internal
biog2_v2.0_unigene11761 biogeco2 v2.0 397
AutoFact: Regulator of nonsense transcripts, putative n=1 Tax=Ricinus communis RepID=B9SD55_RICCO 0.0
FL-Next: tr=Regulator of nonsense transcripts, putative; Ricinus communis (Castor bean). 0.0
Blast2go: regulator of nonsense transcripts 2-like 0.0
N-terminus
biog2_v2.0_unigene11964 biogeco2 v2.0 373
AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor transcription initiation factor 0.0
Internal
biog2_v2.0_unigene12598 biogeco2 v2.0 469
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa1-like 0.0
Internal
biog2_v2.0_unigene13749 biogeco2 v2.0 567
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
Internal
biog2_v2.0_unigene13936 biogeco2 v2.0 408
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEH0_RICCO 0.0
FL-Next: sp=Putative F-box/kelch-repeat protein At4g19330; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein decapping 5 0.0
Putative N-terminus
biog2_v2.0_unigene14393 biogeco2 v2.0 544
AutoFact: pfam00656, Peptidase_C14, Caspase domain 9.0e-25
FL-Next: tr=Metacaspase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: metacaspase 9 0.0
C-terminus
biog2_v2.0_unigene14675 biogeco2 v2.0 483
AutoFact: glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15688 biogeco2 v2.0 180
AutoFact: Unassigned protein
Blast2go: glycosyl hydrolase family 35 protein 3.2191e-14
unknown
biog2_v2.0_unigene15821 biogeco2 v2.0 172
AutoFact: Phytochrome-associated serine/threonine protein phosphatase 3 n=13 Tax=Embryophyta RepID=FYPP3_ARATH 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoprotein phosphatase 0.0
N-terminus
biog2_v2.0_unigene17721 biogeco2 v2.0 962
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: sp=Histidine kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase cytokinin receptor 0.0
C-terminus
biog2_v2.0_unigene17844 biogeco2 v2.0 1243
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=D5A9W9_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoprotein phosphatase 0.0
Complete
biog2_v2.0_unigene18610 biogeco2 v2.0 1232
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
biog2_v2.0_unigene19425 biogeco2 v2.0 92
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain