Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene298 biogeco2 v2.0 659
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp binding 0.0
Internal
biog2_v2.0_unigene3236 biogeco2 v2.0 1026
AutoFact: Adenine phosphoribosyltransferase 1 n=1 Tax=Elaeis guineensis RepID=B3TLV7_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenine phosphoribosyltransferase 1 0.0
Complete
biog2_v2.0_unigene3347 biogeco2 v2.0 617
AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator-like aprr1-like 0.0
C-terminus
biog2_v2.0_unigene8150 biogeco2 v2.0 505
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transferring glycosyl 0.0
Internal
biog2_v2.0_unigene9807 biogeco2 v2.0 723
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Internal
biog2_v2.0_unigene10117 biogeco2 v2.0 436
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: Isoform 2 of Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 0.0
Blast2go: gtp binding 0.0
Internal
biog2_v2.0_unigene10542 biogeco2 v2.0 315
AutoFact: transcription factor-like protein [Arabidopsis thaliana] gb|AED90905.1| transcription factor-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=NF-X1-type zinc finger protein NFXL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription x-box 0.0
Internal
biog2_v2.0_unigene10702 biogeco2 v2.0 391
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
biog2_v2.0_unigene12357 biogeco2 v2.0 579
AutoFact: protein trichome birefringence-like 11 [Arabidopsis thaliana] gb|AAX23913.1| hypothetical protein At5g19160 [Arabidopsis thaliana] gb|AAZ52758.1| expressed protein [Arabidopsis thaliana] gb|AAZ52759.1| expressed protein [Arabidopsis thaliana] gb|AED92663. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome birefringence-like 11 0.0
C-terminus
biog2_v2.0_unigene13133 biogeco2 v2.0 243
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog2_v2.0_unigene13258 biogeco2 v2.0 400
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
Blast2go: gtp binding 0.0
Coding
biog2_v2.0_unigene14564 biogeco2 v2.0 251
AutoFact: protein plastid transcriptionally active 16 [Arabidopsis thaliana] emb|CAB51187.1| putative protein [Arabidopsis thaliana] gb|AEE78204.1| protein plastid transcriptionally active 16 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein plastid transcriptionally active 16 0.0
Internal
biog2_v2.0_unigene15694 biogeco2 v2.0 214
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEI7_RICCO 0.0
FL-Next: sp=Serine/threonine-protein kinase STN7, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase chloroplastic-like 0.0
Internal
biog2_v2.0_unigene16112 biogeco2 v2.0 399
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phytoclock 1 0.0
Putative C-terminus
biog2_v2.0_unigene17036 biogeco2 v2.0 399
AutoFact: RecName: Full=Calcium-activated potassium channel subunit alpha-1; AltName: Full=BK channel; AltName: Full=BKCA alpha; AltName: Full=Calcium-activated potassium channel, subfamily M subunit alpha-1; AltName: Full=K(VCA)alpha; AltName: Full=KCa1.1; AltName 1.0e-13
FL-Next: tr=Putative uncharacterized protein SmKC1_2; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: voltage-gated ion channel superfamily 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain