|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog2_v2.0_unigene2648
|
biogeco2 v2.0
|
1131
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZV5_RICCO
|
6.0e-16
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: agenet domain-containing protein
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene2736
|
biogeco2 v2.0
|
761
|
|
• AutoFact: prephenate dehydratase [Ipomoea trifida] dbj|BAF37790.1| hypothetical protein [Ipomoea trifida]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene2962
|
biogeco2 v2.0
|
880
|
|
• AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max]
|
0.0
|
|
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
|
• Blast2go: dna-directed rna polymerase ii subunit rpb7
|
0.0
|
|
Complete
|
|
biog2_v2.0_unigene3102
|
biogeco2 v2.0
|
919
|
|
• AutoFact: Ribonucleoside-diphosphate reductase n=1 Tax=Musa acuminata RepID=Q6RZW3_MUSAC
|
0.0
|
|
• FL-Next: sp=Ribonucleoside-diphosphate reductase large subunit; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: ribonucleoside-diphosphate reductase large subunit
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3149
|
biogeco2 v2.0
|
1174
|
|
• AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3402
|
biogeco2 v2.0
|
629
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb|AAM26693.1| At5g26743 [Arabidopsis thaliana] gb|AAO42779.1| At5g26743 [Arabidopsis thaliana] gb|AED93564.1| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3420
|
biogeco2 v2.0
|
199
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZV5_RICCO
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: unknown [Picea sitchensis]
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3595
|
biogeco2 v2.0
|
460
|
|
• AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH
|
7.0e-38
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Coding
|
|
biog2_v2.0_unigene3630
|
biogeco2 v2.0
|
340
|
|
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] sp|Q8GYR4.1|QKIL4_ARATH RecName: Full=KH domain-containing protein At3g08620; AltName: Full=Quaking-like protein 4 dbj|BAC42103.1| unknown protein [Arabidopsis thaliana] gb|AEE74654.1| RNA-bi
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: kh domain-containing protein at2g38610-like
|
0.0
|
|
N-terminus
|
|
biog2_v2.0_unigene3699
|
biogeco2 v2.0
|
228
|
|
• AutoFact: uridylate kinase [Arabidopsis thaliana] dbj|BAB01794.1| unnamed protein product [Arabidopsis thaliana] gb|AAK92763.1| putative uridylate kinase [Arabidopsis thaliana] gb|AAM14100.1| putative uridylate kinase [Arabidopsis thaliana] gb|AEE76131.1| uridylate
|
0.0
|
|
• FL-Next: tr=Putative uridylate kinase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: uridylate kinase
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene3816
|
biogeco2 v2.0
|
294
|
|
• AutoFact: mRNA cap guanine-N7 methyltransferase n=1 Tax=Picea sitchensis RepID=C0PS33_PICSI
|
0.0
|
|
• FL-Next: sp=mRNA cap guanine-N7 methyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mrna cap guanine-n7 methyltransferase 1
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene3834
|
biogeco2 v2.0
|
355
|
|
• AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE
|
0.0
|
|
• Blast2go: exosome complex exonuclease dis3 rrp44
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene3944
|
biogeco2 v2.0
|
333
|
|
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 14
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene4013
|
biogeco2 v2.0
|
676
|
|
• AutoFact: Sterol regulatory element-binding protein site 2 protease, putative n=1 Tax=Ricinus communis RepID=B9S7Z4_RICCO
|
0.0
|
|
• FL-Next: tr=Ethylene-dependent gravitropism-deficient and yellow-green-like 3 protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: sterol regulatory element-binding protein site 2
|
0.0
|
|
Putative N-terminus
|
|
biog2_v2.0_unigene4151
|
biogeco2 v2.0
|
769
|
|
• AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: exosome complex component rrp43-like
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene4221
|
biogeco2 v2.0
|
393
|
|
• AutoFact: putative partner of Nob1 [Oryza sativa Japonica Group] dbj|BAB90119.1| putative partner of Nob1 [Oryza sativa Japonica Group] gb|EEE55513.1| hypothetical protein OsJ_03725 [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: partner of nob1
|
0.0
|
|
C-terminus
|
|
biog2_v2.0_unigene4372
|
biogeco2 v2.0
|
457
|
|
• AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly polymerase
|
0.0
|
|
Internal
|
|
biog2_v2.0_unigene4464
|
biogeco2 v2.0
|
272
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog2_v2.0_unigene4563
|
biogeco2 v2.0
|
916
|
|
• AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger ccch domain-containing protein 37
|
0.0
|
|
Putative C-terminus
|
|
biog2_v2.0_unigene4712
|
biogeco2 v2.0
|
842
|
|
• AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] sp|Q8GYR4.1|QKIL4_ARATH RecName: Full=KH domain-containing protein At3g08620; AltName: Full=Quaking-like protein 4 dbj|BAC42103.1| unknown protein [Arabidopsis thaliana] gb|AEE74654.1| RNA-bi
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: kh domain-containing protein at2g38610-like
|
0.0
|
|
C-terminus
|
