Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: root development

Term: GO:0048364  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene282 biogeco2 v2.0 421
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQ58_VITVI 0.0
Blast2go: neutral invertase-like protein 0.0
unknown
biog2_v2.0_unigene367 biogeco2 v2.0 359
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
unknown
biog2_v2.0_unigene404 biogeco2 v2.0 557
AutoFact: phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol synthase 0.0
N-terminus
biog2_v2.0_unigene463 biogeco2 v2.0 1307
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9REF5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt4 0.0
C-terminus
biog2_v2.0_unigene587 biogeco2 v2.0 278
AutoFact: Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative n=1 Tax=Ricinus communis RepID=B9S125_RICCO 0.0
FL-Next: sp=Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mannosyl-oligosaccharide -alpha-mannosidase mns3-like 0.0
N-terminus
biog2_v2.0_unigene935 biogeco2 v2.0 759
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein pleiotropic regulatory locus 1-like 0.0
C-terminus
biog2_v2.0_unigene2196 biogeco2 v2.0 381
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
C-terminus
biog2_v2.0_unigene3292 biogeco2 v2.0 360
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog2_v2.0_unigene3300 biogeco2 v2.0 539
AutoFact: abhydrolase domain-containing protein 13 [Danio rerio] sp|Q32LS6.1|ABHDD_DANRE RecName: Full=Abhydrolase domain-containing protein 13 gb|AAI09446.1| Zgc:123286 [Danio rerio] 2.8026e-45
FL-Next: tr=Protein bem46, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene3356 biogeco2 v2.0 485
AutoFact: CDC27 domain containing protein 4.0e-06
Blast2go: dna-binding protein bin4 0.0
unknown
biog2_v2.0_unigene3942 biogeco2 v2.0 1770
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group e4 0.0
Putative Complete
biog2_v2.0_unigene4414 biogeco2 v2.0 917
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclophilin 0.0
Complete
biog2_v2.0_unigene6222 biogeco2 v2.0 755
AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein pleiotropic regulatory locus 1-like 0.0
N-terminus
biog2_v2.0_unigene7276 biogeco2 v2.0 561
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative C-terminus
biog2_v2.0_unigene7455 biogeco2 v2.0 551
AutoFact: phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphatidylinositol synthase 0.0
C-terminus
biog2_v2.0_unigene7940 biogeco2 v2.0 577
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: sp=SWI/SNF complex component SNF12 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
biog2_v2.0_unigene8114 biogeco2 v2.0 508
AutoFact: diacylglycerol kinase 3 [Arabidopsis thaliana] gb|AAL57635.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AAM98254.1| At2g18730/MSF3.11 [Arabidopsis thaliana] gb|AEC06799.1| diacylglycerol kinase 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: diacylglycerol kinase 0.0
Complete
biog2_v2.0_unigene8558 biogeco2 v2.0 517
AutoFact: putative auxin-induced protein, IAA12 [Arabidopsis thaliana] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indole-3-acetic acid inducible 12 0.0
Internal
biog2_v2.0_unigene8564 biogeco2 v2.0 612
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
Internal
biog2_v2.0_unigene8778 biogeco2 v2.0 509
AutoFact: low-phosphate root 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multi-copper oxidase type i family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain