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Assembly Name: biogeco2 v2.0

Name: structural molecule activity

Term: GO:0005198  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene387 biogeco2 v2.0 511
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta 0.0
Internal
biog2_v2.0_unigene1417 biogeco2 v2.0 397
• AutoFact: PAP_fibrillin domain containing protein 6.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid-lipid-associated protein 8 0.0
Internal
biog2_v2.0_unigene1813 biogeco2 v2.0 829
• AutoFact: SYS1 domain containing protein 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta -1 0.0
Putative N-terminus
biog2_v2.0_unigene1988 biogeco2 v2.0 571
• AutoFact: actin related protein 2/3 complex, subunit 2 [Arabidopsis thaliana] gb|AAM60850.1| unknown [Arabidopsis thaliana] dbj|BAC43079.1| unknown protein [Arabidopsis thaliana] gb|AAO63372.1| At1g30825 [Arabidopsis thaliana] gb|AEE31281.1| actin related protein 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin related protein 2 3 subunit 2 0.0
N-terminus
biog2_v2.0_unigene2145 biogeco2 v2.0 663
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta 0.0
Internal
biog2_v2.0_unigene2414 biogeco2 v2.0 713
• AutoFact: Vesicle-associated protein 4-2 n=3 Tax=Arabidopsis RepID=VAP42_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated protein 4-2-like 0.0
C-terminus
biog2_v2.0_unigene2424 biogeco2 v2.0 1158
• AutoFact: membrane-associated mannitol-induced protein [Arabidopsis thaliana] sp|Q1ECE0.1|VAP41_ARATH RecName: Full=Vesicle-associated protein 4-1; AltName: Full=Plant VAP homolog 4-1; Short=AtPVA41; AltName: Full=Protein MEMBRANE-ASSOCIATED MANNITOL-INDUCED; Short 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated protein 4-2-like 0.0
Complete
biog2_v2.0_unigene2472 biogeco2 v2.0 1584
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit gamma 0.0
N-terminus
biog2_v2.0_unigene2812 biogeco2 v2.0 245
• AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 4.0e-29
• Blast2go: catenin beta-1 4.68707e-39
Putative coding
biog2_v2.0_unigene3026 biogeco2 v2.0 351
• AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: iron-sulfur assembly protein 0.0
N-terminus
biog2_v2.0_unigene3448 biogeco2 v2.0 462
• AutoFact: FtsZ1 n=1 Tax=Marchantia polymorpha RepID=Q84K12_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cell division protein ftsz homolog chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene3643 biogeco2 v2.0 259
• AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: at4g01940 t7b11_20 0.0
Internal
biog2_v2.0_unigene3845 biogeco2 v2.0 1414
• AutoFact: Plastid-lipid-Associated Protein (Fragment) n=1 Tax=Nicotiana tabacum RepID=O24141_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid-lipid-associated protein 0.0
Complete
biog2_v2.0_unigene4150 biogeco2 v2.0 542
• AutoFact: Serine acetyltransferase 7 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q8H0P5_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine acetyltransferase 0.0
C-terminus
biog2_v2.0_unigene5631 biogeco2 v2.0 524
• AutoFact: Vesicle-associated protein 4-2 n=3 Tax=Arabidopsis RepID=VAP42_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated protein 4-2-like 0.0
N-terminus
biog2_v2.0_unigene5814 biogeco2 v2.0 1428
• AutoFact: vesicle-associated membrane protein-associated protein [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated membrane 0.0
Complete
biog2_v2.0_unigene5845 biogeco2 v2.0 620
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
Internal
biog2_v2.0_unigene5979 biogeco2 v2.0 1322
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: coatomer subunit gamma 0.0
C-terminus
biog2_v2.0_unigene7768 biogeco2 v2.0 599
• AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid division protein 0.0
C-terminus
biog2_v2.0_unigene7782 biogeco2 v2.0 497
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• FL-Next: sp=Coatomer subunit alpha-1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: coatomer alpha 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain