Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene47 biogeco2 v2.0 412
AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene66 biogeco2 v2.0 133
AutoFact: Proliferating-cell nucleolar antigen p120, putative n=1 Tax=Ricinus communis RepID=B9S9W8_RICCO 0.0
Blast2go: ribosomal rna methyltransferase nop2-like 0.0
unknown
biog2_v2.0_unigene74 biogeco2 v2.0 809
AutoFact: pfam00270, DEAD, DEAD/DEAH box helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene111 biogeco2 v2.0 261
AutoFact: pescadillo-like protein [Zinnia violacea] 0.0
FL-Next: sp=Pescadillo homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: pescadillo-like protein 0.0
Internal
biog2_v2.0_unigene288 biogeco2 v2.0 417
AutoFact: putative small nuclear ribonucleoprotein D1 [Brassica napus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein sm d1 0.0
Putative Complete
biog2_v2.0_unigene353 biogeco2 v2.0 573
AutoFact: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis thaliana] sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2; Short=AtMPF2; Includes: RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyoxysomal fatty acid beta-oxidation multifunctional protein mfp-a 0.0
Internal
biog2_v2.0_unigene419 biogeco2 v2.0 257
AutoFact: autophagy regulatory protein (ISS) [Ostreococcus tauri] emb|CAL51693.1| autophagy regulatory protein (ISS) [Ostreococcus tauri] 4.0e-26
Blast2go: protein autophagy 2 0.0
unknown
biog2_v2.0_unigene598 biogeco2 v2.0 2196
AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tcp-1 cpn60 chaperonin family protein 0.0
Complete
biog2_v2.0_unigene642 biogeco2 v2.0 823
AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s protease regulatory subunit 0.0
C-terminus
biog2_v2.0_unigene760 biogeco2 v2.0 593
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g033860; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: gamyb-binding protein 0.0
Internal
biog2_v2.0_unigene805 biogeco2 v2.0 842
AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna tbp-interacting protein 0.0
C-terminus
biog2_v2.0_unigene930 biogeco2 v2.0 452
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene979 biogeco2 v2.0 403
AutoFact: multiple RNA-binding domain-containing protein 1 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces elongisporus NRRL YB-4239] 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable rna-binding protein 19-like 4.2039e-45
Putative N-terminus
biog2_v2.0_unigene1074 biogeco2 v2.0 1320
AutoFact: replication factor C subunit 2/4 [Arabidopsis thaliana] gb|AAL07059.1| putative replication factor [Arabidopsis thaliana] gb|AAL32715.1| Similar replication factor C, 37-kDa subunit [Arabidopsis thaliana] gb|AAM61276.1| putative replication factor [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 0.0
Putative Complete
biog2_v2.0_unigene1157 biogeco2 v2.0 228
AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene1169 biogeco2 v2.0 379
AutoFact: pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Rattus norvegicus] gb|EDL80236.1| pantothenate kinase 2 (Hallervorden-Spatz syndrome) (predicted), isoform CRA_a [Rattus norvegicus] 5.04467e-44
FL-Next: tr=Pantothenate kinase putative; Albugo laibachii Nc14. 0.0
Blast2go: pantothenate kinase 1 0.0
Internal
biog2_v2.0_unigene1272 biogeco2 v2.0 553
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Putative Complete
biog2_v2.0_unigene1313 biogeco2 v2.0 403
AutoFact: 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- thiolase 0.0
C-terminus
biog2_v2.0_unigene1432 biogeco2 v2.0 993
AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mki67 fha domain-interacting nucleolar phospho 0.0
Complete
biog2_v2.0_unigene1493 biogeco2 v2.0 1367
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain