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Assembly Name: biogeco2 v2.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene12181 biogeco2 v2.0 267
AutoFact: Thylakoid lumenal 15 kDa protein 1, chloroplastic n=3 Tax=Arabidopsis RepID=TL15A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene12197 biogeco2 v2.0 209
AutoFact: thylakoid lumenal protein [Arabidopsis thaliana] sp|Q9SW33.1|TL1Y_ARATH RecName: Full=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Flags: Precursor emb|CAB36735.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79402.1| hypothetical protein [Ara 0.0
FL-Next: sp=Thylakoid lumenal 17.9 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12816 biogeco2 v2.0 342
AutoFact: PsbP domain-containing protein 5 [Arabidopsis thaliana] sp|P82715.3|PPD5_ARATH RecName: Full=PsbP domain-containing protein 5, chloroplastic; AltName: Full=OEC23-like protein 6; AltName: Full=PsbP-related thylakoid lumenal protein 4; AltName: Full=Thylako 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene13119 biogeco2 v2.0 294
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
Internal
biog2_v2.0_unigene15130 biogeco2 v2.0 291
AutoFact: UPF0603 protein Os05g0401100, chloroplastic n=3 Tax=Oryza sativa RepID=U603_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene15136 biogeco2 v2.0 238
AutoFact: UPF0603 protein Os05g0401100, chloroplastic n=3 Tax=Oryza sativa RepID=U603_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene15221 biogeco2 v2.0 433
AutoFact: photosystem I reaction center subunit III [Vigna radiata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15480 biogeco2 v2.0 309
AutoFact: UPF0603 protein Os05g0401100, chloroplastic n=3 Tax=Oryza sativa RepID=U603_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene16142 biogeco2 v2.0 372
AutoFact: Thylakoid lumenal 15 kDa protein 1, chloroplastic n=3 Tax=Arabidopsis RepID=TL15A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene16416 biogeco2 v2.0 299
AutoFact: PsbP domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: psbp domain-containing protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene17723 biogeco2 v2.0 490
AutoFact: Electron transporter, putative n=1 Tax=Ricinus communis RepID=B9SPX9_RICCO 0.0
Blast2go: uncharacterized protein 0.0
Putative coding
biog2_v2.0_unigene17976 biogeco2 v2.0 176
AutoFact: Peptidyl-prolyl cis-trans isomerase B, ppib, putative n=1 Tax=Ricinus communis RepID=B9RE54_RICCO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
biog2_v2.0_unigene18100 biogeco2 v2.0 526
AutoFact: Thylakoid lumenal 17.4 kDa protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SJT2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thylakoid lumenal protein 0.0
C-terminus
biog2_v2.0_unigene18235 biogeco2 v2.0 224
AutoFact: Pentapeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8H1Q1.1|TL225_ARATH RecName: Full=Thylakoid lumenal protein At1g12250, chloroplastic; Flags: Precursor gb|AAN13098.1| unknown protein [Arabidopsis thaliana] gb|AEE28857.1| Pentapeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentapeptide repeat-containing protein 0.0
Internal
biog2_v2.0_unigene18524 biogeco2 v2.0 530
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
Internal
biog2_v2.0_unigene19232 biogeco2 v2.0 381
AutoFact: ascorbate peroxidase 4 [Arabidopsis thaliana] sp|P82281.2|TL29_ARATH RecName: Full=Thylakoid lumenal 29 kDa protein, chloroplastic; Short=TL29; AltName: Full=AtAPx07; AltName: Full=P29; AltName: Full=Probable L-ascorbate peroxidase 4; Flags: Precursor gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ascorbate peroxidase 4 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain