Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: cell wall

Term: GO:0005618  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9196 biogeco2 v2.0 361
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: sp=Probable beta-D-xylosidase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene9301 biogeco2 v2.0 364
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9321 biogeco2 v2.0 355
AutoFact: AtEB1c-like protein n=1 Tax=Nicotiana tabacum RepID=C4B8D7_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein rp eb family member 1-like 0.0
N-terminus
biog2_v2.0_unigene9466 biogeco2 v2.0 412
AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.64489e-31
Internal
biog2_v2.0_unigene9621 biogeco2 v2.0 138
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog2_v2.0_unigene9809 biogeco2 v2.0 616
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
Internal
biog2_v2.0_unigene9888 biogeco2 v2.0 371
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: sp=Beta-D-xylosidase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
Internal
biog2_v2.0_unigene9972 biogeco2 v2.0 240
AutoFact: 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_190089.2| 40S ribosomal protein S20-1 [Arabidopsis thaliana] ref|NP_001078781.1| 40S ribosomal protein S20-1 [Arabidopsis thaliana] sp|P49200.2|RS201_ARATH RecName: Full=40S ribosomal protein S20-1 0.0
Blast2go: 40s ribosomal protein s20 0.0
unknown
biog2_v2.0_unigene9975 biogeco2 v2.0 458
AutoFact: Wounding-induced ribonuclease gene protein n=1 Tax=Zinnia violacea RepID=Q41723_ZINEL 0.0
FL-Next: sp=Ribonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease t2 0.0
Internal
biog2_v2.0_unigene10150 biogeco2 v2.0 410
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
biog2_v2.0_unigene10159 biogeco2 v2.0 645
AutoFact: calcium-dependent lipid-binding domain-containing plant phosphoribosyltransferase-like protein [Arabidopsis thaliana] emb|CAB67616.1| anthranilate phosphoribosyltransferase-like protein [Arabidopsis thaliana] gb|AEE79712.1| calcium-dependent lipid-binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anthranilate phosphoribosyltransferase-like protein 0.0
Internal
biog2_v2.0_unigene10229 biogeco2 v2.0 496
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=C0PT44_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase 0.0
Internal
biog2_v2.0_unigene10232 biogeco2 v2.0 577
AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial processing peptidase 0.0
Internal
biog2_v2.0_unigene10289 biogeco2 v2.0 536
AutoFact: RNase PD2 (Fragment) n=1 Tax=Prunus dulcis RepID=Q9LLS1_PRUDU 0.0
FL-Next: sp=Ribonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribonuclease 1 0.0
Putative N-terminus
biog2_v2.0_unigene10315 biogeco2 v2.0 419
AutoFact: Microsomal signal peptidase 23 kD subunit, putative n=1 Tax=Ricinus communis RepID=B9RF33_RICCO 0.0
Blast2go: signal peptidase complex subunit 3b 0.0
unknown
biog2_v2.0_unigene10339 biogeco2 v2.0 398
AutoFact: Melibiase family protein [Arabidopsis thaliana] gb|AEE77151.1| Melibiase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
Internal
biog2_v2.0_unigene10586 biogeco2 v2.0 196
AutoFact: Elongation factor Tu n=1 Tax=Ricinus communis RepID=B9SFP0_RICCO 0.0
Blast2go: mitochondrial elongation factor tu 0.0
unknown
biog2_v2.0_unigene10663 biogeco2 v2.0 198
AutoFact: Magnesium chelatase ATPase subunit I n=4 Tax=BEP clade RepID=Q53RM0_ORYSJ 0.0
Blast2go: magnesium-chelatase subunit chli 0.0
unknown
biog2_v2.0_unigene10708 biogeco2 v2.0 389
AutoFact: [G] COG1472 Beta-glucosidase-related glycosidases 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-xylosidase alpha-l-arabinofuranosidase 2-like 0.0
N-terminus
biog2_v2.0_unigene10896 biogeco2 v2.0 154
AutoFact: xylan endohydrolase isoenzyme, putative [Arabidopsis thaliana] 1.0e-19
Blast2go: endo- -beta-xylanase a-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain