Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene5 biogeco2 v2.0 640
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transport factor 2 0.0
Complete
biog2_v2.0_unigene10 biogeco2 v2.0 647
AutoFact: Eukaryotic peptide chain release factor subunit 1-3 n=3 Tax=Spermatophyta RepID=ERF1Z_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene43 biogeco2 v2.0 521
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spliceosomal protein 0.0
Putative C-terminus
biog2_v2.0_unigene93 biogeco2 v2.0 862
AutoFact: Putative spermine synthase (Fragment) n=2 Tax=Cupressaceae RepID=Q76JP8_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spermine synthase 0.0
Putative N-terminus
biog2_v2.0_unigene287 biogeco2 v2.0 820
AutoFact: Anamorsin homolog 2 n=1 Tax=Picea sitchensis RepID=DRE22_PICSI 0.0
FL-Next: sp=Anamorsin homolog 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anamorsin homolog 0.0
N-terminus
biog2_v2.0_unigene387 biogeco2 v2.0 511
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
Internal
biog2_v2.0_unigene477 biogeco2 v2.0 378
AutoFact: Chaperone protein dnaJ n=1 Tax=Syntrophothermus lipocalidus DSM 12680 RepID=D7CNX4_SYNLT 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein dnaj chloroplastic-like 0.0
C-terminus
biog2_v2.0_unigene594 biogeco2 v2.0 1109
AutoFact: Polyketide_cyc2 domain containing protein 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl8 0.0
Complete
biog2_v2.0_unigene595 biogeco2 v2.0 390
AutoFact: Caryophyllene/humulene synthase n=1 Tax=Pinus sylvestris RepID=B4XAK4_PINSY 0.0
FL-Next: tr=Caryophyllene/humulene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: longifolene synthase 0.0
N-terminus
biog2_v2.0_unigene618 biogeco2 v2.0 995
AutoFact: programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] gb|AAL06544.1|AF412091_1 AT5g64830/MXK3_5 [Arabidopsis thaliana] dbj|BAA97295.1| unnamed protein product [Arabidopsis thaliana] gb|ABG48386.1| At5g64830 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: programmed cell death 2 c-terminal domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene677 biogeco2 v2.0 1753
AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5 0.0
N-terminus
biog2_v2.0_unigene718 biogeco2 v2.0 1332
AutoFact: RecName: Full=Endoplasmin homolog; AltName: Full=Glucose-regulated protein 94 homolog; Short=GRP-94 homolog; Flags: Precursor gb|AAA16785.1| heat shock protein 90 [Catharanthus roseus] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 90 0.0
C-terminus
biog2_v2.0_unigene719 biogeco2 v2.0 267
AutoFact: E-alpha-bisabolene synthase n=1 Tax=Picea abies RepID=Q675L6_PICAB 1.0e-20
FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2.61435e-21
Internal
biog2_v2.0_unigene748 biogeco2 v2.0 1562
AutoFact: RecName: Full=Endoplasmin homolog; AltName: Full=Glucose-regulated protein 94 homolog; Short=GRP-94 homolog; Flags: Precursor gb|AAA16785.1| heat shock protein 90 [Catharanthus roseus] 0.0
FL-Next: tr=GRP94; Pinus taeda (Loblolly pine). 0.0
Blast2go: heat shock protein 90 0.0
N-terminus
biog2_v2.0_unigene798 biogeco2 v2.0 288
AutoFact: programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] gb|AAL06544.1|AF412091_1 AT5g64830/MXK3_5 [Arabidopsis thaliana] dbj|BAA97295.1| unnamed protein product [Arabidopsis thaliana] gb|ABG48386.1| At5g64830 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: programmed cell death 2 c-terminal domain-containing protein 0.0
Internal
biog2_v2.0_unigene837 biogeco2 v2.0 597
AutoFact: Ubiquitin-activating enzyme E1, putative n=1 Tax=Ricinus communis RepID=B9STZ8_RICCO 0.0
FL-Next: sp=Adenylyltransferase and sulfurtransferase MOCS3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sulfurtransferase mocs3 0.0
Internal
biog2_v2.0_unigene869 biogeco2 v2.0 965
AutoFact: Pyrroline-5-carboxylate synthetase n=1 Tax=Gossypium arboreum RepID=B1A2U9_GOSAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrroline-5-carboxylate synthetase 0.0
Putative N-terminus
biog2_v2.0_unigene889 biogeco2 v2.0 245
AutoFact: PREDICTED: alpha-type platelet-derived growth factor receptor-like n=1 Tax=Anolis carolinensis RepID=UPI0002039625 4.0e-21
Blast2go: alpha-type platelet-derived growth factor receptor 3.27233e-25
unknown
biog2_v2.0_unigene906 biogeco2 v2.0 617
AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: type a response regulator 0.0
C-terminus
biog2_v2.0_unigene924 biogeco2 v2.0 938
AutoFact: putative dienelactone hydrolase family protein [Salvia miltiorrhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endo- - -beta-d- 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain