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Assembly Name: biogeco2 v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2745 biogeco2 v2.0 602
AutoFact: Malic enzyme n=1 Tax=Picea sitchensis RepID=B8LRQ8_PICSI 0.0
FL-Next: sp=Malic enzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene2759 biogeco2 v2.0 1378
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: rop-family small gtpase 0.0
Complete
biog2_v2.0_unigene2771 biogeco2 v2.0 867
AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=30 Tax=Embryophyta RepID=PP2A3_ORYSJ 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2a catalytic subunit 0.0
N-terminus
biog2_v2.0_unigene2782 biogeco2 v2.0 1237
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB38899.1| putative protein [Arabidopsis thaliana] emb|CAB80649.1| putative protein [Arabidopsis thaliana] gb|AEE87129.1| uncharacterized protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative Complete
biog2_v2.0_unigene2870 biogeco2 v2.0 805
AutoFact: 26S protease regulatory subunit 6A homolog A n=26 Tax=Magnoliophyta RepID=PS6AA_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome aaa-atpase subunit rpt5a 0.0
N-terminus
biog2_v2.0_unigene2963 biogeco2 v2.0 672
AutoFact: Mevalonate kinase n=1 Tax=Hevea brasiliensis RepID=Q944G2_HEVBR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mevalonate kinase 0.0
N-terminus
biog2_v2.0_unigene2973 biogeco2 v2.0 548
AutoFact: casein kinase 2, beta polypeptide [Arabidopsis thaliana] sp|O80507.1|CSK2E_ARATH RecName: Full=Putative casein kinase II subunit beta-4; Short=CK II beta-4 gb|AAC27470.1| putative casein kinase II beta subunit [Arabidopsis thaliana] gb|AAM65621.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase beta polypeptide 0.0
C-terminus
biog2_v2.0_unigene3049 biogeco2 v2.0 644
AutoFact: Delta 1-pyrroline-5-carboxylate synthetase, putative n=2 Tax=Euphorbiaceae RepID=B9SE11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrroline-5-carboxylate synthetase 0.0
C-terminus
biog2_v2.0_unigene3086 biogeco2 v2.0 341
AutoFact: putative Der1-like family protein [Cynodon dactylon] 0.0
FL-Next: sp=Derlin-1.1; Zea mays (Maize). 0.0
Blast2go: derlin- -like 0.0
N-terminus
biog2_v2.0_unigene3125 biogeco2 v2.0 1470
AutoFact: translation initiation factor nCBP [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cap-binding protein 0.0
Complete
biog2_v2.0_unigene3164 biogeco2 v2.0 750
AutoFact: Polcalcin Jun o, putative n=1 Tax=Ricinus communis RepID=B9SJ25_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding pollen allergen 2.10195e-44
N-terminus
biog2_v2.0_unigene3255 biogeco2 v2.0 509
AutoFact: putative nitrite transporter [Arabidopsis thaliana] sp|Q9SX20.1|PTR18_ARATH RecName: Full=Probable nitrite transporter At1g68570 gb|AAD49986.1|AC008075_19 Similar to gb|AF023472 peptide transporter from Hordeum vulgare and is a member of the PF|00854 Pept 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrite transporter 0.0
Internal
biog2_v2.0_unigene3278 biogeco2 v2.0 810
AutoFact: small ubiquitin-related modifier 2 [Arabidopsis thaliana] sp|Q9FLP6.1|SUMO2_ARATH RecName: Full=Small ubiquitin-related modifier 2; Short=AtSUMO2 dbj|BAB08585.1| ubiquitin-like protein SMT3-like [Arabidopsis thaliana] gb|AAL91628.1| AT5g55160/MCO15_11 [Ar 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein smt3 0.0
Complete
biog2_v2.0_unigene3288 biogeco2 v2.0 444
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene3289 biogeco2 v2.0 1318
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene3344 biogeco2 v2.0 520
AutoFact: casein kinase 2, beta polypeptide [Arabidopsis thaliana] sp|O80507.1|CSK2E_ARATH RecName: Full=Putative casein kinase II subunit beta-4; Short=CK II beta-4 gb|AAC27470.1| putative casein kinase II beta subunit [Arabidopsis thaliana] gb|AAM65621.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase beta polypeptide 0.0
N-terminus
biog2_v2.0_unigene3434 biogeco2 v2.0 632
AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=30 Tax=Embryophyta RepID=PP2A3_ORYSJ 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2a catalytic subunit 0.0
C-terminus
biog2_v2.0_unigene3732 biogeco2 v2.0 1691
AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=15 Tax=Embryophyta RepID=PP2A3_ARATH 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pp2ac-2 - phosphatase 2a isoform 2 belonging to family 2 0.0
Complete
biog2_v2.0_unigene3795 biogeco2 v2.0 466
AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gmp synthase 0.0
C-terminus
biog2_v2.0_unigene3899 biogeco2 v2.0 567
AutoFact: putative uracil phosphoribosyltransferase [Arabidopsis thaliana] sp|Q9FKS0.1|UKL1_ARATH RecName: Full=Uridine kinase-like protein 1, chloroplastic; Includes: RecName: Full=Uridine kinase; Short=UK; Includes: RecName: Full=Putative uracil phosphoribosyltra 0.0
FL-Next: Isoform 2 of Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 0.0
Blast2go: uracil phosphoribosyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain