Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2221 biogeco2 v2.0 239
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase, cytosolic n=4 Tax=Spermatophyta RepID=G3PC_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyceraldehyde 3-phosphate dehydrogenase 0.0
C-terminus
biog2_v2.0_unigene2252 biogeco2 v2.0 963
AutoFact: Adenylate kinase B n=8 Tax=Magnoliophyta RepID=KAD2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase b-like 0.0
Complete
biog2_v2.0_unigene2260 biogeco2 v2.0 539
AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5ABX5_PICSI 0.0
FL-Next: sp=Methionine aminopeptidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionine aminopeptidase 2b 0.0
C-terminus
biog2_v2.0_unigene2275 biogeco2 v2.0 557
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
biog2_v2.0_unigene2383 biogeco2 v2.0 478
AutoFact: S28 ribosomal protein (Fragment) n=1 Tax=Triticum aestivum RepID=Q7X9K4_WHEAT 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s28 1.64568e-25
Complete
biog2_v2.0_unigene2398 biogeco2 v2.0 471
AutoFact: RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleoside-diphosphate reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonucleotide reductase small subunit 0.0
N-terminus
biog2_v2.0_unigene2411 biogeco2 v2.0 1276
AutoFact: regulator of ribonuclease activity a [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of ribonuclease-like protein 2 0.0
Complete
biog2_v2.0_unigene2416 biogeco2 v2.0 478
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 38-like 0.0
C-terminus
biog2_v2.0_unigene2466 biogeco2 v2.0 1748
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Complete
biog2_v2.0_unigene2475 biogeco2 v2.0 932
AutoFact: Protein-L-isoaspartate O-methyltransferase n=1 Tax=Picea sitchensis RepID=A9P2J7_PICSI 0.0
FL-Next: sp=Protein-L-isoaspartate O-methyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene2493 biogeco2 v2.0 1162
AutoFact: phosducin-like protein 3 homolog [Arabidopsis thaliana] gb|AAR24679.1| At3g50960 [Arabidopsis thaliana] dbj|BAF00947.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78732.1| phosducin-like protein 3 homolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin domain-containing protein 9 0.0
Complete
biog2_v2.0_unigene2512 biogeco2 v2.0 1177
AutoFact: Serine/threonine-protein phosphatase n=2 Tax=Embryophyta RepID=A9TZL9_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene2516 biogeco2 v2.0 825
AutoFact: Eukaryotic peptide chain release factor subunit 1-3 n=3 Tax=Spermatophyta RepID=ERF1Z_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2636 biogeco2 v2.0 538
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
C-terminus
biog2_v2.0_unigene2656 biogeco2 v2.0 620
AutoFact: Superoxide dismutase [Cu-Zn] n=2 Tax=Pinus sylvestris RepID=Q9AR80_PINSY 0.0
FL-Next: sp=Superoxide dismutase [Cu-Zn]; Pinus sylvestris (Scots pine). 0.0
Blast2go: superoxide dismutase 2 0.0
Complete
biog2_v2.0_unigene2688 biogeco2 v2.0 620
AutoFact: putative nitrite transporter [Arabidopsis thaliana] sp|Q9SX20.1|PTR18_ARATH RecName: Full=Probable nitrite transporter At1g68570 gb|AAD49986.1|AC008075_19 Similar to gb|AF023472 peptide transporter from Hordeum vulgare and is a member of the PF|00854 Pept 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrite transporter 0.0
Putative C-terminus
biog2_v2.0_unigene2694 biogeco2 v2.0 1156
AutoFact: Chaperonin protein n=6 Tax=Poaceae RepID=Q6ASR1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: t-complex protein 1 subunit zeta 0.0
N-terminus
biog2_v2.0_unigene2715 biogeco2 v2.0 313
AutoFact: RecName: Full=Fructose-1,6-bisphosphatase, cytosolic; Short=FBPase; AltName: Full=CY-F1; AltName: Full=D-fructose-1,6-bisphosphate 1-phosphohydrolase emb|CAA54265.1| fructose-1,6-bisphosphatase [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructose- -bisphosphatase 0.0
N-terminus
biog2_v2.0_unigene2716 biogeco2 v2.0 409
AutoFact: programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] gb|AAL06544.1|AF412091_1 AT5g64830/MXK3_5 [Arabidopsis thaliana] dbj|BAA97295.1| unnamed protein product [Arabidopsis thaliana] gb|ABG48386.1| At5g64830 [Arabidopsis thali 0.0
Blast2go: programmed cell death 2 c-terminal domain-containing protein 0.0
Putative coding
biog2_v2.0_unigene2730 biogeco2 v2.0 1815
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain