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Assembly Name: biogeco2 v2.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene17222 biogeco2 v2.0 365
AutoFact: TFIIF_alpha multi-domain protein 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cax-interacting protein 4 0.0
Internal
biog2_v2.0_unigene17300 biogeco2 v2.0 296
AutoFact: urease accessory protein D [Arabidopsis thaliana] emb|CAC85462.1| putative urease accessory protein D [Arabidopsis thaliana] gb|AEC09052.1| urease accessory protein D [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g004840; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: urease accessory protein d 0.0
N-terminus
biog2_v2.0_unigene17381 biogeco2 v2.0 544
AutoFact: Calcium-binding pollen allergen n=1 Tax=Arachis hypogaea RepID=Q45W79_ARAHY 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polcalcin 0.0
Putative N-terminus
biog2_v2.0_unigene17387 biogeco2 v2.0 527
AutoFact: Delta 1-pyrroline-5-carboxylate synthetase, putative n=2 Tax=Euphorbiaceae RepID=B9SE11_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyrroline-5-carboxylate synthetase 0.0
Internal
biog2_v2.0_unigene17453 biogeco2 v2.0 340
AutoFact: kinesin 5 [Arabidopsis thaliana] gb|AEE82489.1| kinesin 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein 0.0
Complete
biog2_v2.0_unigene17549 biogeco2 v2.0 404
AutoFact: Piwi domain containing protein 4.0e-08
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal
biog2_v2.0_unigene17606 biogeco2 v2.0 115
AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Selaginella moellendorffii RepID=D8SWI5_SELML 3.0e-19
Blast2go: ubiquitin specific peptidase y chromosome 3.45375e-22
unknown
biog2_v2.0_unigene17618 biogeco2 v2.0 303
AutoFact: putative uracil phosphoribosyltransferase [Arabidopsis thaliana] sp|Q9FKS0.1|UKL1_ARATH RecName: Full=Uridine kinase-like protein 1, chloroplastic; Includes: RecName: Full=Uridine kinase; Short=UK; Includes: RecName: Full=Putative uracil phosphoribosyltra 0.0
FL-Next: sp=Uridine kinase-like protein 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uracil phosphoribosyltransferase 0.0
Putative C-terminus
biog2_v2.0_unigene17625 biogeco2 v2.0 427
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative Complete
biog2_v2.0_unigene17680 biogeco2 v2.0 165
AutoFact: tyrosine phosphatase 1 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosine phosphatase 1 0.0
Internal
biog2_v2.0_unigene17828 biogeco2 v2.0 822
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scp1-like small phosphatase 5 0.0
C-terminus
biog2_v2.0_unigene17830 biogeco2 v2.0 1175
AutoFact: Autophagy-related protein 3 n=1 Tax=Picea sitchensis RepID=A9NVL1_PICSI 0.0
FL-Next: sp=Autophagy-related protein 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: autophagy-related protein 3 0.0
Complete
biog2_v2.0_unigene17844 biogeco2 v2.0 1243
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Picea sitchensis RepID=D5A9W9_PICSI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoprotein phosphatase 0.0
Complete
biog2_v2.0_unigene18053 biogeco2 v2.0 412
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE28469.1| leucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Leucyl-tRNA synthetase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18424 biogeco2 v2.0 172
AutoFact: Unassigned protein
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
unknown
biog2_v2.0_unigene18431 biogeco2 v2.0 241
AutoFact: PREDICTED: similar to pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001984DF5 0.0
FL-Next: sp=Conserved oligomeric Golgi complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene18438 biogeco2 v2.0 108
AutoFact: [D] COG5072 Serine/threonine kinase of the haspin family 4.0e-26
Blast2go: serine threonine-protein kinase 0.0
unknown
biog2_v2.0_unigene18465 biogeco2 v2.0 386
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
biog2_v2.0_unigene18474 biogeco2 v2.0 86
AutoFact: Thioredoxin-like protein 4A n=56 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
Blast2go: thioredoxin-like 4a 0.0
unknown
biog2_v2.0_unigene18547 biogeco2 v2.0 110
AutoFact: Methionine aminopeptidase n=1 Tax=Picea sitchensis RepID=D5ABX5_PICSI 0.0
FL-Next: sp=Methionine aminopeptidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methionine aminopeptidase 2b 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain