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Assembly Name: biogeco2 v2.0

Name: intracellular protein transport

Term: GO:0006886  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene64 biogeco2 v2.0 719
• AutoFact: Gamma-soluble NSF attachment protein [Arabidopsis thaliana] sp|Q9SPE5.1|SNAG_ARATH RecName: Full=Gamma-soluble NSF attachment protein; Short=Gamma-SNAP; AltName: Full=N-ethylmaleimide-sensitive factor attachment protein gamma gb|AAF01285.1|AF177990_1 gamm 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gamma-soluble nsf attachment protein 0.0
C-terminus
biog2_v2.0_unigene597 biogeco2 v2.0 545
• AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: microtubule organization protein 0.0
Putative Complete
biog2_v2.0_unigene697 biogeco2 v2.0 505
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S215_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: target of myb protein 1 0.0
C-terminus
biog2_v2.0_unigene733 biogeco2 v2.0 646
• AutoFact: putative tethering factor SEC34 (ISS) [Ostreococcus tauri] emb|CAL52453.1| putative tethering factor SEC34 (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein T9L24.37; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: sec34-like protein 0.0
N-terminus
biog2_v2.0_unigene838 biogeco2 v2.0 592
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• Blast2go: protein 0.0
Coding
biog2_v2.0_unigene1488 biogeco2 v2.0 356
• AutoFact: B-cell receptor-associated protein 31-like containing protein n=5 Tax=Andropogoneae RepID=B6U1I6_MAIZE 0.0
• Blast2go: b-cell receptor-associated protein 31-like protein 0.0
Putative coding
biog2_v2.0_unigene1813 biogeco2 v2.0 829
• AutoFact: SYS1 domain containing protein 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta -1 0.0
Putative N-terminus
biog2_v2.0_unigene1980 biogeco2 v2.0 170
• AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
• Blast2go: beta-adaptin-like protein c-like 0.0
unknown
biog2_v2.0_unigene2265 biogeco2 v2.0 1381
• AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 0.0
Complete
biog2_v2.0_unigene2472 biogeco2 v2.0 1584
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit gamma 0.0
N-terminus
biog2_v2.0_unigene3109 biogeco2 v2.0 522
• AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-adaptin-like protein c-like 0.0
Internal
biog2_v2.0_unigene3306 biogeco2 v2.0 467
• AutoFact: pfam04841, Vps16_N, Vps16, N-terminal region 0.0
• FL-Next: tr=Vacuolar protein sorting vps16, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene3435 biogeco2 v2.0 415
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ran-binding protein 0.0
Putative Complete
biog2_v2.0_unigene3714 biogeco2 v2.0 376
• AutoFact: B-cell receptor-associated protein 31-like containing protein n=5 Tax=Andropogoneae RepID=B6U1I6_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: b-cell receptor-associated protein 31-like protein 0.0
Putative N-terminus
biog2_v2.0_unigene3859 biogeco2 v2.0 989
• AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene4069 biogeco2 v2.0 414
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ran-binding protein 0.0
Internal
biog2_v2.0_unigene4359 biogeco2 v2.0 596
• AutoFact: vesicle transport v-SNARE 11-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle transport v-snare 13 0.0
Putative Complete
biog2_v2.0_unigene5592 biogeco2 v2.0 1279
• AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 0.0
Complete
biog2_v2.0_unigene5629 biogeco2 v2.0 690
• AutoFact: syntaxin 1B/2/3 [Arabidopsis thaliana] sp|Q9SRV7.1|SY131_ARATH RecName: Full=Putative syntaxin-131; Short=AtSYP131 gb|AAF00648.1|AC009540_25 s-syntaxin-like protein [Arabidopsis thaliana] gb|AEE73995.1| syntaxin 1B/2/3 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: syntaxin 1b 2 3 0.0
C-terminus
biog2_v2.0_unigene5779 biogeco2 v2.0 1883
• AutoFact: beta-adaptin-like protein B [Arabidopsis thaliana] sp|Q9SUS3.1|APBLB_ARATH RecName: Full=Beta-adaptin-like protein B; Short=At-bB-Ad; Short=At-betaB-Ad; AltName: Full=AP complex subunit beta-B; AltName: Full=Adaptor protein complex AP subunit beta-B; AltN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta-adaptin-like protein c-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain