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Assembly Name: biogeco2 v2.0

Name: DNA-directed RNA polymerase activity

Term: GO:0003899  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1738 biogeco2 v2.0 913
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb4 0.0
Complete
biog2_v2.0_unigene2753 biogeco2 v2.0 734
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Putative Complete
biog2_v2.0_unigene2962 biogeco2 v2.0 880
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
Complete
biog2_v2.0_unigene4436 biogeco2 v2.0 881
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc1 0.0
Complete
biog2_v2.0_unigene8369 biogeco2 v2.0 475
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Complete
biog2_v2.0_unigene8656 biogeco2 v2.0 252
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
unknown
biog2_v2.0_unigene8830 biogeco2 v2.0 535
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
N-terminus
biog2_v2.0_unigene9856 biogeco2 v2.0 341
AutoFact: DNA-directed RNA polymerase n=6 Tax=core eudicotyledons RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb1-like 0.0
N-terminus
biog2_v2.0_unigene10040 biogeco2 v2.0 360
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
Internal
biog2_v2.0_unigene10259 biogeco2 v2.0 535
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Putative coding
biog2_v2.0_unigene13084 biogeco2 v2.0 232
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
unknown
biog2_v2.0_unigene13711 biogeco2 v2.0 204
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
C-terminus
biog2_v2.0_unigene14328 biogeco2 v2.0 349
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
biog2_v2.0_unigene16997 biogeco2 v2.0 403
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Putative N-terminus
biog2_v2.0_unigene17840 biogeco2 v2.0 1071
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 0.0
Complete
biog2_v2.0_unigene18027 biogeco2 v2.0 357
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
biog2_v2.0_unigene19016 biogeco2 v2.0 605
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain