Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: response to bacterium

Term: GO:0009617  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene1524 biogeco2 v2.0 512
• AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Putative N-terminus
biog2_v2.0_unigene2893 biogeco2 v2.0 385
• AutoFact: Cytochrome c oxidase copper chaperone n=2 Tax=Zea mays RepID=B6TDC7_MAIZE 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytochrome c oxidase copper chaperone 5.44145e-39
Complete
biog2_v2.0_unigene3048 biogeco2 v2.0 531
• AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=C0PT31_PICSI 0.0
• FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene4238 biogeco2 v2.0 1576
• AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 0.0
• FL-Next: tr=(E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
• Blast2go: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.0
C-terminus
biog2_v2.0_unigene5110 biogeco2 v2.0 2030
• AutoFact: Cellulose synthase-like A1 n=2 Tax=Pinaceae RepID=A3QT94_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
C-terminus
biog2_v2.0_unigene7056 biogeco2 v2.0 676
• AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 0.0
• FL-Next: sp=Anthranilate synthase component I-1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: anthranilate synthase alpha subunit 0.0
C-terminus
biog2_v2.0_unigene8024 biogeco2 v2.0 420
• AutoFact: homoserine kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homoserine kinase 0.0
C-terminus
biog2_v2.0_unigene8063 biogeco2 v2.0 595
• AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 0.0
• FL-Next: tr=(E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
• Blast2go: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.0
N-terminus
biog2_v2.0_unigene8972 biogeco2 v2.0 197
• AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 0.0
• Blast2go: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.0
unknown
biog2_v2.0_unigene9409 biogeco2 v2.0 442
• AutoFact: Aig1, putative n=1 Tax=Ricinus communis RepID=B9R8X8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aig1 domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene9466 biogeco2 v2.0 412
• AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.64489e-31
Internal
biog2_v2.0_unigene9862 biogeco2 v2.0 432
• AutoFact: Cellulose synthase-like A2 n=1 Tax=Pinus taeda RepID=A3QT95_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A2; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
Internal
biog2_v2.0_unigene11209 biogeco2 v2.0 323
• AutoFact: Anthranilate synthase alpha subunit n=1 Tax=Ruta graveolens RepID=Q41155_RUTGR 0.0
• FL-Next: sp=Anthranilate synthase component I-1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: anthranilate synthase alpha subunit 0.0
Internal
biog2_v2.0_unigene11367 biogeco2 v2.0 297
• AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 0.0
Internal
biog2_v2.0_unigene11948 biogeco2 v2.0 681
• AutoFact: Aig1, putative n=1 Tax=Ricinus communis RepID=B9R8X8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aig1 domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene12348 biogeco2 v2.0 444
• AutoFact: Cellulose synthase-like A1 n=2 Tax=Pinaceae RepID=A3QT94_PINTA 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
unknown
biog2_v2.0_unigene12714 biogeco2 v2.0 254
• AutoFact: Cellulose synthase-like A2 n=1 Tax=Pinus taeda RepID=A3QT95_PINTA 0.0
• FL-Next: tr=Cellulose synthase-like A2; Pinus taeda (Loblolly pine). 0.0
• Blast2go: glucomannan 4-beta-mannosyltransferase 9-like 0.0
Internal
biog2_v2.0_unigene12750 biogeco2 v2.0 335
• AutoFact: putative protein kinase [Arabidopsis thaliana] gb|AAC04483.1| putative protein kinase [Arabidopsis thaliana] 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: receptor like protein kinase -like 0.0
Internal
biog2_v2.0_unigene13275 biogeco2 v2.0 201
• AutoFact: homoserine kinase [Arabidopsis thaliana] 0.0
• Blast2go: homoserine kinase 0.0
unknown
biog2_v2.0_unigene16493 biogeco2 v2.0 463
• AutoFact: homoserine kinase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: homoserine kinase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain