Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene7405 biogeco2 v2.0 835
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene7884 biogeco2 v2.0 268
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
Blast2go: aux iaa protein 0.0
unknown
biog2_v2.0_unigene7949 biogeco2 v2.0 597
AutoFact: DNA primase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TVE8_VITVI 0.0
FL-Next: sp=DNA primase; Vitis vinifera (Grape). 0.0
Blast2go: dna primase small subunit 0.0
Internal
biog2_v2.0_unigene8326 biogeco2 v2.0 402
AutoFact: [R] COG2940 Proteins containing SET domain 9.0e-31
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
unknown
biog2_v2.0_unigene8369 biogeco2 v2.0 475
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Complete
biog2_v2.0_unigene8415 biogeco2 v2.0 408
AutoFact: HLH domain containing protein 4.0e-13
Blast2go: transcription factor bim1 0.0
unknown
biog2_v2.0_unigene8578 biogeco2 v2.0 601
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
biog2_v2.0_unigene8656 biogeco2 v2.0 252
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
unknown
biog2_v2.0_unigene8695 biogeco2 v2.0 471
AutoFact: pfam06217, GAGA_bind, GAGA binding protein-like family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic pentacysteine 6 0.0
C-terminus
biog2_v2.0_unigene8830 biogeco2 v2.0 535
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
N-terminus
biog2_v2.0_unigene9276 biogeco2 v2.0 395
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
Blast2go: aux iaa protein 0.0
unknown
biog2_v2.0_unigene10040 biogeco2 v2.0 360
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
Internal
biog2_v2.0_unigene10123 biogeco2 v2.0 605
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Internal
biog2_v2.0_unigene10259 biogeco2 v2.0 535
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Putative coding
biog2_v2.0_unigene10807 biogeco2 v2.0 172
AutoFact: WRKY family transcription factor [Arabidopsis thaliana] gb|AAQ65182.1| At4g31805 [Arabidopsis thaliana] dbj|BAE99346.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85962.1| WRKY family transcription factor [Arabidopsis thaliana] 3.0e-07
Blast2go: protein 4.64927e-10
unknown
biog2_v2.0_unigene10856 biogeco2 v2.0 272
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Internal
biog2_v2.0_unigene11317 biogeco2 v2.0 455
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Internal
biog2_v2.0_unigene11540 biogeco2 v2.0 384
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Internal
biog2_v2.0_unigene11643 biogeco2 v2.0 468
AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein ppmc6 0.0
Putative N-terminus
biog2_v2.0_unigene12432 biogeco2 v2.0 111
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
Blast2go: protein 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain