Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1902 biogeco2 v2.0 995
AutoFact: putative peroxisomal Ca-dependent solute carrier protein [Oryza sativa Japonica Group] gb|AAP06894.1| hypothetical protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2048 biogeco2 v2.0 494
AutoFact: Forever young oxidoreductase n=2 Tax=Solanum RepID=Q8W2K0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: forever young oxidoreductase 0.0
C-terminus
biog2_v2.0_unigene2140 biogeco2 v2.0 830
AutoFact: GL18719 gene product from transcript GL18719-RA 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eyes shut 0.0
Complete
biog2_v2.0_unigene2192 biogeco2 v2.0 465
AutoFact: Chaperone binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene2248 biogeco2 v2.0 494
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAM64904.1| unknown [Arabidopsis thaliana] gb|ABG48396.1| At1g56090 [Arabidopsis thaliana] dbj|BAF01338.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33341.1| tetratricopeptide r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene2264 biogeco2 v2.0 681
AutoFact: RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; AltName: Full=OsNek5 dbj|BAB63817.1| putative LSTK-1-like kinase [Oryza sativa Japonica Group] dbj|BAC01197.1| putative LSTK-1-like kinase [Oryza sativa Japon 1.0e-19
Blast2go: atp binding 0.0
Putative coding
biog2_v2.0_unigene2266 biogeco2 v2.0 937
AutoFact: Putative pol polyprotein n=1 Tax=Brassica oleracea var. botrytis RepID=A2T1U5_BRAOB 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
biog2_v2.0_unigene2300 biogeco2 v2.0 560
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|ABK28304.1| unknown [Arabidopsis thaliana] gb|AEE81971.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] 3.0e-21
Blast2go: ubiquitin carboxyl-terminal hydrolase-like protein 1.24328e-24
Coding
biog2_v2.0_unigene2344 biogeco2 v2.0 469
AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana] 0.0
Blast2go: uncharacterized protein loc100788861 0.0
unknown
biog2_v2.0_unigene2434 biogeco2 v2.0 269
AutoFact: RecName: Full=Mitochondrial import receptor subunit TOM20; AltName: Full=Translocase of outer membrane 20 kDa subunit emb|CAA63223.1| TOM20 [Solanum tuberosum] 4.06377e-44
Blast2go: mitochondrial import receptor subunit tom20 0.0
unknown
biog2_v2.0_unigene2457 biogeco2 v2.0 1391
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Putative Complete
biog2_v2.0_unigene2529 biogeco2 v2.0 1029
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2559 biogeco2 v2.0 1347
AutoFact: Phd/F-box containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBF1_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd f-box containing 0.0
Complete
biog2_v2.0_unigene2637 biogeco2 v2.0 1664
AutoFact: dioxygenase-like protein [Arabidopsis thaliana] dbj|BAB11066.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65524.1| unknown [Arabidopsis thaliana] gb|AAP37672.1| At5g48020 [Arabidopsis thaliana] dbj|BAE99693.1| hypothetical protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene2683 biogeco2 v2.0 445
AutoFact: phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|AAM19830.1| AT4g39280/T22F8_180 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phenylalanyl-trna synthetase alpha chain 0.0
C-terminus
biog2_v2.0_unigene2685 biogeco2 v2.0 1560
AutoFact: chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gb|ABF59189.1| unknown protein [Arabidopsis thaliana] gb|AEE35318.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] 2.0e-19
FL-Next: tr=Heat shock-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: chaperone -domain containing protein 6.37961e-27
Complete
biog2_v2.0_unigene2697 biogeco2 v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.77492e-18
Complete
biog2_v2.0_unigene2725 biogeco2 v2.0 395
AutoFact: Saccharopine dehydrogenase [Arabidopsis thaliana] sp|Q8LGI2.2|SCPDH_ARATH RecName: Full=Probable mitochondrial saccharopine dehydrogenase At5g39410; Short=SDH gb|AAD09232.1| unknown [Arabidopsis thaliana] dbj|BAB11014.1| unnamed protein product [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable mitochondrial saccharopine dehydrogenase at5g39410-like 0.0
C-terminus
biog2_v2.0_unigene2789 biogeco2 v2.0 562
AutoFact: Mo25 domain containing protein 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene2800 biogeco2 v2.0 1336
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome regulatory subunit n2 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain