Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10335 biogeco2 v2.0 337
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
C-terminus
biog2_v2.0_unigene10440 biogeco2 v2.0 564
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 1.27339e-34
Internal
biog2_v2.0_unigene10516 biogeco2 v2.0 277
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
N-terminus
biog2_v2.0_unigene10596 biogeco2 v2.0 401
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
Blast2go: phytochrome 0.0
unknown
biog2_v2.0_unigene10649 biogeco2 v2.0 329
AutoFact: MYB transcription factor MYB172 n=1 Tax=Glycine max RepID=Q0PJF6_SOYBN 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 3.06115e-19
Putative N-terminus
biog2_v2.0_unigene10652 biogeco2 v2.0 371
AutoFact: Ethylene-responsive transcription factor TINY n=1 Tax=Arabidopsis thaliana RepID=TINY_ARATH 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor tiny 1.95438e-17
Internal
biog2_v2.0_unigene10791 biogeco2 v2.0 170
AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky dna-binding protein 21 0.0
Internal
biog2_v2.0_unigene10820 biogeco2 v2.0 418
AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 0.0
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: type-a response regulator 0.0
N-terminus
biog2_v2.0_unigene10898 biogeco2 v2.0 504
AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
Blast2go: myb-related transcription factor 0.0
Putative coding
biog2_v2.0_unigene10979 biogeco2 v2.0 350
AutoFact: protein TWIN LOV 1 [Arabidopsis thaliana] dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] gb|AEC05613.1| protein TWIN LOV 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein twin lov 1 0.0
Internal
biog2_v2.0_unigene10986 biogeco2 v2.0 213
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
N-terminus
biog2_v2.0_unigene11071 biogeco2 v2.0 240
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
C-terminus
biog2_v2.0_unigene11076 biogeco2 v2.0 306
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
N-terminus
biog2_v2.0_unigene11197 biogeco2 v2.0 347
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene11257 biogeco2 v2.0 409
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
N-terminus
biog2_v2.0_unigene11438 biogeco2 v2.0 484
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of polycomb-like protein 0.0
Internal
biog2_v2.0_unigene11471 biogeco2 v2.0 225
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9RN12_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane associated protein phosphatase 2c 0.0
Internal
biog2_v2.0_unigene11521 biogeco2 v2.0 265
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
unknown
biog2_v2.0_unigene11630 biogeco2 v2.0 307
AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
Internal
biog2_v2.0_unigene11780 biogeco2 v2.0 190
AutoFact: RecName: Full=Ornithine carbamoyltransferase, chloroplastic; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor gb|AAA74997.1| ornithine carbamoyltransferase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ornithine carbamoyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain