Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9055 biogeco2 v2.0 646
AutoFact: Transcription factor (Fragment) n=2 Tax=Lycoris longituba RepID=D6MKG3_9ASPA 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene9183 biogeco2 v2.0 434
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: probable lysine-specific demethylase jmj14-like 0.0
Internal
biog2_v2.0_unigene9217 biogeco2 v2.0 496
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Putative N-terminus
biog2_v2.0_unigene9249 biogeco2 v2.0 473
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene9254 biogeco2 v2.0 433
AutoFact: Map3k delta-1 protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RZR2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
biog2_v2.0_unigene9319 biogeco2 v2.0 431
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
Putative C-terminus
biog2_v2.0_unigene9371 biogeco2 v2.0 363
AutoFact: AP2-related transcription factor AP2L3 (Fragment) n=2 Tax=Picea RepID=Q106U2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apetala2-like protein 0.0
C-terminus
biog2_v2.0_unigene9450 biogeco2 v2.0 166
AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 0.0
FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
biog2_v2.0_unigene9541 biogeco2 v2.0 362
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
Internal
biog2_v2.0_unigene9721 biogeco2 v2.0 267
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80-like 0.0
C-terminus
biog2_v2.0_unigene9751 biogeco2 v2.0 568
AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9768 biogeco2 v2.0 409
AutoFact: TATA-box binding protein [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-binding protein 0.0
C-terminus
biog2_v2.0_unigene9778 biogeco2 v2.0 292
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 8.65302e-42
C-terminus
biog2_v2.0_unigene9949 biogeco2 v2.0 259
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog2_v2.0_unigene9956 biogeco2 v2.0 608
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
biog2_v2.0_unigene9989 biogeco2 v2.0 106
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
unknown
biog2_v2.0_unigene9994 biogeco2 v2.0 146
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
Internal
biog2_v2.0_unigene10083 biogeco2 v2.0 736
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Homeobox transcription factor KN3; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn3 0.0
Internal
biog2_v2.0_unigene10113 biogeco2 v2.0 515
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 0.0
Internal
biog2_v2.0_unigene10198 biogeco2 v2.0 365
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain