Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene2319 biogeco2 v2.0 380
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative coding
biog2_v2.0_unigene2321 biogeco2 v2.0 1244
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nac domain ipr003441 0.0
Putative C-terminus
biog2_v2.0_unigene2333 biogeco2 v2.0 571
• AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: needly-like protein 0.0
C-terminus
biog2_v2.0_unigene2562 biogeco2 v2.0 837
• AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein dr1-like protein 0.0
Complete
biog2_v2.0_unigene2653 biogeco2 v2.0 1439
• AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog2_v2.0_unigene2676 biogeco2 v2.0 2034
• AutoFact: DELLA protein n=3 Tax=Malus RepID=Q0HA72_MALDO 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: della protein 0.0
C-terminus
biog2_v2.0_unigene2686 biogeco2 v2.0 597
• AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 2.0e-38
• FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: bzip transcription factor 1.4013e-45
N-terminus
biog2_v2.0_unigene2755 biogeco2 v2.0 1333
• AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
• FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin-responsive protein 0.0
Complete
biog2_v2.0_unigene2773 biogeco2 v2.0 1016
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene2857 biogeco2 v2.0 1551
• AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Putative N-terminus
biog2_v2.0_unigene2961 biogeco2 v2.0 529
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
• Blast2go: protein 0.0
Coding
biog2_v2.0_unigene2977 biogeco2 v2.0 869
• AutoFact: Myosin_tail_1 domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
biog2_v2.0_unigene2997 biogeco2 v2.0 280
• AutoFact: Os03g0191000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DUE4_ORYSJ 4.0e-13
• Blast2go: calmodulin-binding transcription activator 2 1.2504e-13
unknown
biog2_v2.0_unigene3037 biogeco2 v2.0 1275
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 3 0.0
Complete
biog2_v2.0_unigene3180 biogeco2 v2.0 701
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
C-terminus
biog2_v2.0_unigene3219 biogeco2 v2.0 569
• AutoFact: Histone deacetylase (Fragment) n=7 Tax=rosids RepID=D7SM47_VITVI 0.0
• FL-Next: sp=Histone deacetylase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
biog2_v2.0_unigene3220 biogeco2 v2.0 854
• AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: light-inducible protein cprf2-like 0.0
Putative C-terminus
biog2_v2.0_unigene3244 biogeco2 v2.0 496
• AutoFact: transcription factor CPC [Arabidopsis thaliana] sp|O22059.1|CPC_ARATH RecName: Full=Transcription factor CPC; AltName: Full=Protein CAPRICE dbj|BAA21917.1| CPC [Arabidopsis thaliana] gb|AAD23043.1| putative MYB family transcription factor [Arabidopsis tha 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caprice-like myb3 6.92368e-15
Complete
biog2_v2.0_unigene3319 biogeco2 v2.0 462
• AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chitin-inducible gibberellin-responsive protein 0.0
C-terminus
biog2_v2.0_unigene3347 biogeco2 v2.0 617
• AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: two-component response regulator-like aprr1-like 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain