Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene15616 biogeco2 v2.0 248
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene15644 biogeco2 v2.0 298
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SEE4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lil3 protein 0.0
Internal
biog2_v2.0_unigene15645 biogeco2 v2.0 303
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
biog2_v2.0_unigene15750 biogeco2 v2.0 260
AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 0.0
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene15798 biogeco2 v2.0 483
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15806 biogeco2 v2.0 290
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 5.94001e-18
Putative coding
biog2_v2.0_unigene15859 biogeco2 v2.0 714
AutoFact: Myb [Nicotiana tabacum] 7.0e-26
FL-Next: sp=Myb-related protein 3R-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: myb-related protein 3r-1-like 1.14511e-28
Putative C-terminus
biog2_v2.0_unigene15929 biogeco2 v2.0 236
AutoFact: Milkweed pod1 n=1 Tax=Zea mays RepID=B5LZ60_MAIZE 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rolled leaf 9 0.0
Internal
biog2_v2.0_unigene15939 biogeco2 v2.0 305
AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 622 0.0
Putative C-terminus
biog2_v2.0_unigene16023 biogeco2 v2.0 490
AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
Blast2go: gata binding protein 1 0.0
unknown
biog2_v2.0_unigene16027 biogeco2 v2.0 248
AutoFact: PREDICTED: tyrosine-protein kinase ABL1 n=1 Tax=Monodelphis domestica RepID=UPI00020F590D 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mutant bcr abl fusion protein 1.6344e-37
Internal
biog2_v2.0_unigene16060 biogeco2 v2.0 444
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] emb|CAB81804.1| putative protein [Arabidopsis thaliana] gb|AAM60968.1| unknown [Arabidopsis thaliana] gb|AAM98182.1| putative protein [Arabidopsis thaliana] gb|AAP13430.1| At3g54390 1.0e-06
Blast2go: protein 2.66892e-10
Coding
biog2_v2.0_unigene16112 biogeco2 v2.0 399
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phytoclock 1 0.0
Putative C-terminus
biog2_v2.0_unigene16132 biogeco2 v2.0 387
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
C-terminus
biog2_v2.0_unigene16210 biogeco2 v2.0 288
AutoFact: Pseudo response regulator n=1 Tax=Selaginella moellendorffii RepID=D8T4E0_SELML 0.0
FL-Next: tr=Golden 2-like protein 1; Physcomitrella patens. 0.0
Blast2go: pseudo response regulator 0.0
Internal
biog2_v2.0_unigene16255 biogeco2 v2.0 243
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
FL-Next: sp=FACT complex subunit SSRP1; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
Blast2go: fact complex subunit ssrp1 0.0
Internal
biog2_v2.0_unigene16290 biogeco2 v2.0 488
AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9SU10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 21 0.0
Putative C-terminus
biog2_v2.0_unigene16321 biogeco2 v2.0 551
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor egl1 0.0
C-terminus
biog2_v2.0_unigene16456 biogeco2 v2.0 198
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
Blast2go: tubby-like f-box protein 3 0.0
unknown
biog2_v2.0_unigene16550 biogeco2 v2.0 204
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
Blast2go: sequence-specific dna binding transcription factor 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain