Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene11788 biogeco2 v2.0 134
• AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 622 0.0
Internal
biog2_v2.0_unigene11816 biogeco2 v2.0 451
• AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
N-terminus
biog2_v2.0_unigene12013 biogeco2 v2.0 217
• AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 2.0e-31
• FL-Next: sp=Actin-related protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: actin-related protein 6 2.8125e-36
C-terminus
biog2_v2.0_unigene12014 biogeco2 v2.0 312
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 2.0e-16
• Blast2go: ethylene-responsive element binding factor-like protein 1.0159e-18
Coding
biog2_v2.0_unigene12079 biogeco2 v2.0 560
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
Complete
biog2_v2.0_unigene12231 biogeco2 v2.0 566
• AutoFact: Scarecrow-like 1 transcription factor (Fragment) n=1 Tax=Pinus pinaster RepID=B1PPU0_PINPS 0.0
• FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene12585 biogeco2 v2.0 256
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S7K7_RICCO 0.0
• Blast2go: probable lysine-specific demethylase jmj14-like 0.0
unknown
biog2_v2.0_unigene12667 biogeco2 v2.0 244
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Putative C-terminus
biog2_v2.0_unigene12744 biogeco2 v2.0 285
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
N-terminus
biog2_v2.0_unigene12749 biogeco2 v2.0 273
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
• Blast2go: transcription factor e2 dimerization partner protein 0.0
unknown
biog2_v2.0_unigene12794 biogeco2 v2.0 529
• AutoFact: sensory transduction histidine kinase [Rhodopirellula baltica SH 1] emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1] 3.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sensory transduction histidine kinase 0.0
Internal
biog2_v2.0_unigene12869 biogeco2 v2.0 164
• AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: basic leucine zipper transcription factor-like protein 0.0
Internal
biog2_v2.0_unigene13041 biogeco2 v2.0 273
• AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit 0.0
Internal
biog2_v2.0_unigene13100 biogeco2 v2.0 206
• AutoFact: DRE-binding protein DREB1 n=1 Tax=Cymbidium insigne RepID=A6YT27_9ASPA 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dre-binding protein dreb1 0.0
Internal
biog2_v2.0_unigene13161 biogeco2 v2.0 364
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• Blast2go: tubby-like f-box protein 3 0.0
unknown
biog2_v2.0_unigene13282 biogeco2 v2.0 562
• AutoFact: MADS-domain protein DAL10 n=1 Tax=Picea abies RepID=Q71UQ7_PICAB 0.0
• FL-Next: tr=MADS-domain protein DAL10; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: mads-domain transcription factor 0.0
N-terminus
biog2_v2.0_unigene13313 biogeco2 v2.0 470
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• Blast2go: ocs element-binding 0.0
unknown
biog2_v2.0_unigene13330 biogeco2 v2.0 413
• AutoFact: Predicted protein (Fragment) n=2 Tax=Physcomitrella patens RepID=A9RYR4_PHYPA 0.0
• FL-Next: tr=R2R3-MYB transcription factor MYB9; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: myb-related protein 3r-1-like 0.0
Internal
biog2_v2.0_unigene13355 biogeco2 v2.0 712
• AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
Internal
biog2_v2.0_unigene13567 biogeco2 v2.0 292
• AutoFact: YEATS family protein [Arabidopsis thaliana] dbj|BAB11199.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59945.1| unknown protein [Arabidopsis thaliana] gb|AAM20126.1| unknown protein [Arabidopsis thaliana] gb|AAR28019.1| TAF14b [Arabidopsis thali 0.0
• Blast2go: protein af-9 homolog 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain