Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene17398 biogeco2 v2.0 270
AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] ref|NP_001031992.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana] gb|AAO42302.1| putativ 0.0
Blast2go: probable udp-sugar transporter protein slc35a5-like 0.0
unknown
biog2_v2.0_unigene17442 biogeco2 v2.0 180
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Internal
biog2_v2.0_unigene17632 biogeco2 v2.0 697
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Putative N-terminus
biog2_v2.0_unigene18119 biogeco2 v2.0 515
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
Internal
biog2_v2.0_unigene18190 biogeco2 v2.0 227
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog2_v2.0_unigene18346 biogeco2 v2.0 198
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
Blast2go: transcription factor hy5 0.0
unknown
biog2_v2.0_unigene18407 biogeco2 v2.0 729
AutoFact: translin-like protein [Arabidopsis thaliana] gb|AAL47394.1| translin-like protein [Arabidopsis thaliana] gb|AAD31587.2| translin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translin-like protein 0.0
Internal
biog2_v2.0_unigene18460 biogeco2 v2.0 300
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
Blast2go: homeobox transcription factor kn2 0.0
unknown
biog2_v2.0_unigene18684 biogeco2 v2.0 366
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox transcription factor kn3 0.0
Internal
biog2_v2.0_unigene18821 biogeco2 v2.0 390
AutoFact: Homeobox transcription factor KN4 n=1 Tax=Picea mariana RepID=Q5SC62_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: homeobox transcription factor kn4 0.0
C-terminus
biog2_v2.0_unigene19117 biogeco2 v2.0 298
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box protein 0.0
C-terminus
biog2_v2.0_unigene19230 biogeco2 v2.0 442
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative coding
biog2_v2.0_unigene19314 biogeco2 v2.0 510
AutoFact: CCAAT-box binding factor HAP3 n=3 Tax=Selaginella moellendorffii RepID=D8RRZ5_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
Complete
biog2_v2.0_unigene19356 biogeco2 v2.0 152
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
N-terminus
biog2_v2.0_unigene19371 biogeco2 v2.0 376
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog2_v2.0_unigene19442 biogeco2 v2.0 484
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bzip transcription factor 0.0
Putative C-terminus
biog2_v2.0_unigene19576 biogeco2 v2.0 392
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
Blast2go: hd domain class transcription factor 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain