Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene14527 biogeco2 v2.0 454
• AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
N-terminus
biog2_v2.0_unigene14717 biogeco2 v2.0 356
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
unknown
biog2_v2.0_unigene14746 biogeco2 v2.0 283
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper family protein 0.0
Internal
biog2_v2.0_unigene15002 biogeco2 v2.0 358
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog2_v2.0_unigene15149 biogeco2 v2.0 394
• AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
• Blast2go: tga transcription factor 0.0
Coding
biog2_v2.0_unigene15363 biogeco2 v2.0 261
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper family protein 0.0
N-terminus
biog2_v2.0_unigene15429 biogeco2 v2.0 142
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• Blast2go: homeobox-leucine zipper family protein 0.0
unknown
biog2_v2.0_unigene15806 biogeco2 v2.0 290
• AutoFact: Unassigned protein
• Blast2go: unknown [Picea sitchensis] 5.94001e-18
Putative coding
biog2_v2.0_unigene15896 biogeco2 v2.0 245
• AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 0.0
• Blast2go: ccaat-binding transcription 0.0
Putative coding
biog2_v2.0_unigene16023 biogeco2 v2.0 490
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
• Blast2go: gata binding protein 1 0.0
unknown
biog2_v2.0_unigene16550 biogeco2 v2.0 204
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
• Blast2go: sequence-specific dna binding transcription factor 0.0
unknown
biog2_v2.0_unigene16602 biogeco2 v2.0 569
• AutoFact: Unassigned protein
• FL-Next: sp=RAN GTPase-activating protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nucleotide-binding oligomerization domain-containing protein 0.0
Internal
biog2_v2.0_unigene16640 biogeco2 v2.0 386
• AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable wrky transcription factor 2-like 0.0
Internal
biog2_v2.0_unigene16785 biogeco2 v2.0 423
• AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit c-2 0.0
Putative Complete
biog2_v2.0_unigene16801 biogeco2 v2.0 422
• AutoFact: pfam07777, MFMR, G-box binding protein MFMR 0.0
• Blast2go: transcription factor hbp-1a 0.0
unknown
biog2_v2.0_unigene16917 biogeco2 v2.0 413
• AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS9; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: mads-box transcription factor 3 0.0
C-terminus
biog2_v2.0_unigene16975 biogeco2 v2.0 398
• AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor hy5 0.0
N-terminus
biog2_v2.0_unigene17109 biogeco2 v2.0 412
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
C-terminus
biog2_v2.0_unigene17187 biogeco2 v2.0 463
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III homeodomain-leucine zipper protein C3HDZ2; Taxus globosa. 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
C-terminus
biog2_v2.0_unigene17301 biogeco2 v2.0 272
• AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
• Blast2go: bzip domain class transcription factor 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain