Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene2319 biogeco2 v2.0 380
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative coding
biog2_v2.0_unigene2382 biogeco2 v2.0 657
AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
Blast2go: wrky transcription factor 0.0
unknown
biog2_v2.0_unigene2562 biogeco2 v2.0 837
AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
Complete
biog2_v2.0_unigene2961 biogeco2 v2.0 529
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
Coding
biog2_v2.0_unigene2966 biogeco2 v2.0 736
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
Blast2go: wrky transcription factor 0.0
unknown
biog2_v2.0_unigene2977 biogeco2 v2.0 869
AutoFact: Myosin_tail_1 domain containing protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
biog2_v2.0_unigene3070 biogeco2 v2.0 625
AutoFact: DDT; Homeodomain-related n=1 Tax=Medicago truncatula RepID=A2Q504_MEDTR 2.0e-13
Blast2go: protein 4.19827e-13
unknown
biog2_v2.0_unigene3220 biogeco2 v2.0 854
AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-inducible protein cprf2-like 0.0
Putative C-terminus
biog2_v2.0_unigene3436 biogeco2 v2.0 1009
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative N-terminus
biog2_v2.0_unigene3521 biogeco2 v2.0 968
AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
C-terminus
biog2_v2.0_unigene3564 biogeco2 v2.0 556
AutoFact: Heat Shock Factor 3 [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat stress transcription factor a-4a-like 2.43562e-16
Internal
biog2_v2.0_unigene3584 biogeco2 v2.0 385
AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock factor 0.0
Internal
biog2_v2.0_unigene3914 biogeco2 v2.0 896
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor 0.0
N-terminus
biog2_v2.0_unigene3919 biogeco2 v2.0 1028
AutoFact: bZIP DNA-binding protein [Petroselinum crispum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip domain class transcription factor 0.0
C-terminus
biog2_v2.0_unigene3980 biogeco2 v2.0 1124
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
biog2_v2.0_unigene4197 biogeco2 v2.0 741
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein soc1-like 0.0
N-terminus
biog2_v2.0_unigene4284 biogeco2 v2.0 456
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene4379 biogeco2 v2.0 210
AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
Blast2go: mads-box protein 0.0
unknown
biog2_v2.0_unigene4380 biogeco2 v2.0 427
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
Blast2go: bzip transcription factor 0.0
unknown
biog2_v2.0_unigene4495 biogeco2 v2.0 409
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-23
Blast2go: bzip transcription factor 1.00155e-23
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain