Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene12 biogeco2 v2.0 768
• AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky7 - superfamily of tfs having wrky and zinc finger domains 1.08841e-33
Putative C-terminus
biog2_v2.0_unigene179 biogeco2 v2.0 347
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: Isoform 2 of FACT complex subunit SSRP1 OS=Arabidopsis thaliana GN=SSRP1 0.0
• Blast2go: fact complex subunit ssrp1 0.0
Internal
biog2_v2.0_unigene269 biogeco2 v2.0 328
• AutoFact: GATA transcription factor 12 [Arabidopsis thaliana] sp|P69781.1|GAT12_ARATH RecName: Full=GATA transcription factor 12 dbj|BAH30596.1| hypothetical protein [Arabidopsis thaliana] gb|AED93492.1| GATA transcription factor 12 [Arabidopsis thaliana] 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gata domain class transcription factor 0.0
C-terminus
biog2_v2.0_unigene290 biogeco2 v2.0 382
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
unknown
biog2_v2.0_unigene318 biogeco2 v2.0 1048
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog2_v2.0_unigene322 biogeco2 v2.0 493
• AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
• Blast2go: dehydration responsive element binding protein 7.17662e-34
Coding
biog2_v2.0_unigene407 biogeco2 v2.0 508
• AutoFact: Unassigned protein
• FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
biog2_v2.0_unigene435 biogeco2 v2.0 569
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ocs element-binding 0.0
N-terminus
biog2_v2.0_unigene474 biogeco2 v2.0 1233
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: global transcription factor group 0.0
C-terminus
biog2_v2.0_unigene588 biogeco2 v2.0 1017
• AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
• FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor hbp-1b 0.0
C-terminus
biog2_v2.0_unigene617 biogeco2 v2.0 615
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
C-terminus
biog2_v2.0_unigene650 biogeco2 v2.0 622
• AutoFact: RecName: Full=Ornithine carbamoyltransferase, chloroplastic; AltName: Full=Ornithine transcarbamylase; Short=OTCase; Flags: Precursor gb|AAA74997.1| ornithine carbamoyltransferase [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ornithine carbamoyltransferase 0.0
N-terminus
biog2_v2.0_unigene728 biogeco2 v2.0 678
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccch-type zinc finger protein 0.0
C-terminus
biog2_v2.0_unigene742 biogeco2 v2.0 390
• AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
• Blast2go: ap2 domain containing protein 2.25605e-23
Coding
biog2_v2.0_unigene772 biogeco2 v2.0 399
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: gata binding protein 1 0.0
Internal
biog2_v2.0_unigene818 biogeco2 v2.0 1351
• AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein At4g17050; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ureidoglycine aminohydrolase 0.0
Complete
biog2_v2.0_unigene874 biogeco2 v2.0 576
• AutoFact: AG-motif binding protein-2 n=1 Tax=Nicotiana tabacum RepID=Q76DY2_TOBAC 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gata transcription 2.68754e-34
N-terminus
biog2_v2.0_unigene885 biogeco2 v2.0 1083
• AutoFact: Class III homeodomain leucine zipper protein n=6 Tax=Spermatophyta RepID=E7DX26_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ32; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
Putative C-terminus
biog2_v2.0_unigene970 biogeco2 v2.0 500
• AutoFact: DUF1762 domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
biog2_v2.0_unigene1022 biogeco2 v2.0 581
• AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain