Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene10319 biogeco2 v2.0 286
• AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
Internal
biog2_v2.0_unigene10342 biogeco2 v2.0 404
• AutoFact: kinesin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog2_v2.0_unigene10440 biogeco2 v2.0 564
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit ssrp1 1.27339e-34
Internal
biog2_v2.0_unigene10516 biogeco2 v2.0 277
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
N-terminus
biog2_v2.0_unigene10649 biogeco2 v2.0 329
• AutoFact: MYB transcription factor MYB172 n=1 Tax=Glycine max RepID=Q0PJF6_SOYBN 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb transcription factor 3.06115e-19
Putative N-terminus
biog2_v2.0_unigene10652 biogeco2 v2.0 371
• AutoFact: Ethylene-responsive transcription factor TINY n=1 Tax=Arabidopsis thaliana RepID=TINY_ARATH 8.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription factor tiny 1.95438e-17
Internal
biog2_v2.0_unigene10701 biogeco2 v2.0 344
• AutoFact: casein kinase II alpha [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii subunit alpha-2-like 0.0
C-terminus
biog2_v2.0_unigene10791 biogeco2 v2.0 170
• AutoFact: WRKY DNA-binding protein 21 [Arabidopsis thaliana] sp|O04336.1|WRK21_ARATH RecName: Full=Probable WRKY transcription factor 21; AltName: Full=WRKY DNA-binding protein 21 gb|AAK28441.1|AF272747_1 WRKY DNA-binding protein 21 [Arabidopsis thaliana] gb|AAB630 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky dna-binding protein 21 0.0
Internal
biog2_v2.0_unigene10898 biogeco2 v2.0 504
• AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
• Blast2go: myb-related transcription factor 0.0
Putative coding
biog2_v2.0_unigene10919 biogeco2 v2.0 362
• AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog2_v2.0_unigene10958 biogeco2 v2.0 514
• AutoFact: transcription factor jumonji domain-containing protein [Arabidopsis thaliana] dbj|BAH30353.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33952.1| transcription factor jumonji domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene11027 biogeco2 v2.0 716
• AutoFact: kinesin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog2_v2.0_unigene11071 biogeco2 v2.0 240
• AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna sigma 70 subfamily 0.0
C-terminus
biog2_v2.0_unigene11076 biogeco2 v2.0 306
• AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
N-terminus
biog2_v2.0_unigene11197 biogeco2 v2.0 347
• AutoFact: ATP-synt_B multi-domain protein 6.0e-06
• Blast2go: nucleic acid binding 0.0
unknown
biog2_v2.0_unigene11257 biogeco2 v2.0 409
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
N-terminus
biog2_v2.0_unigene11317 biogeco2 v2.0 455
• AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wrky transcription factor 0.0
Internal
biog2_v2.0_unigene11438 biogeco2 v2.0 484
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
• FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: enhancer of polycomb-like protein 0.0
Internal
biog2_v2.0_unigene11630 biogeco2 v2.0 307
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccch-type zinc finger protein 0.0
Internal
biog2_v2.0_unigene11643 biogeco2 v2.0 468
• AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mikcc mads-domain protein ppmc6 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain