Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8595 biogeco2 v2.0 471
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn2 0.0
Internal
biog2_v2.0_unigene8736 biogeco2 v2.0 445
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
Blast2go: scarecrow-like protein 1-like 0.0
unknown
biog2_v2.0_unigene8804 biogeco2 v2.0 530
AutoFact: Ethylene response factor 1 n=1 Tax=Cucumis sativus RepID=Q5S004_CUCSA 4.0e-14
Blast2go: ethylene-responsive element binding factor-like protein 1.6707e-15
Putative coding
biog2_v2.0_unigene8828 biogeco2 v2.0 505
AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hdzip i protein 0.0
N-terminus
biog2_v2.0_unigene8843 biogeco2 v2.0 458
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sequence-specific dna binding transcription factor 0.0
C-terminus
biog2_v2.0_unigene8945 biogeco2 v2.0 498
AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g003570; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene8976 biogeco2 v2.0 515
AutoFact: Homeobox transcription factor KN4 n=1 Tax=Picea mariana RepID=Q5SC62_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: homeobox transcription factor kn4 0.0
Internal
biog2_v2.0_unigene9009 biogeco2 v2.0 451
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog2_v2.0_unigene9055 biogeco2 v2.0 646
AutoFact: Transcription factor (Fragment) n=2 Tax=Lycoris longituba RepID=D6MKG3_9ASPA 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog2_v2.0_unigene9217 biogeco2 v2.0 496
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Putative N-terminus
biog2_v2.0_unigene9249 biogeco2 v2.0 473
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding 0.0
C-terminus
biog2_v2.0_unigene9319 biogeco2 v2.0 431
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
Putative C-terminus
biog2_v2.0_unigene9371 biogeco2 v2.0 363
AutoFact: AP2-related transcription factor AP2L3 (Fragment) n=2 Tax=Picea RepID=Q106U2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apetala2-like protein 0.0
C-terminus
biog2_v2.0_unigene9751 biogeco2 v2.0 568
AutoFact: R2R3-MYB transcription factor MYB11 [Picea glauca] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene9768 biogeco2 v2.0 409
AutoFact: TATA-box binding protein [Phaseolus vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tata-binding protein 0.0
C-terminus
biog2_v2.0_unigene9815 biogeco2 v2.0 315
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog2_v2.0_unigene9994 biogeco2 v2.0 146
AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 0.0
Internal
biog2_v2.0_unigene10083 biogeco2 v2.0 736
AutoFact: Homeobox transcription factor KN3 n=296 Tax=Pinaceae RepID=Q5SC63_PINTA 0.0
FL-Next: tr=Homeobox transcription factor KN3; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn3 0.0
Internal
biog2_v2.0_unigene10113 biogeco2 v2.0 515
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 0.0
Internal
biog2_v2.0_unigene10198 biogeco2 v2.0 365
AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain