Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene3603 biogeco2 v2.0 333
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: scarecrow-like protein 4-like 0.0
Internal
biog2_v2.0_unigene3785 biogeco2 v2.0 384
• AutoFact: CDC5 protein n=3 Tax=Andropogoneae RepID=Q8W149_MAIZE 6.0e-27
• Blast2go: myb transcription factor 4.49929e-33
unknown
biog2_v2.0_unigene3820 biogeco2 v2.0 444
• AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor-like protein 0.0
C-terminus
biog2_v2.0_unigene3860 biogeco2 v2.0 571
• AutoFact: zinc finger CCCH domain-containing protein 20 [Arabidopsis thaliana] sp|O82199.1|C3H20_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 20; Short=AtC3H20 gb|AAC62135.1| putative CCCH-type zinc finger protein [Arabidopsis thaliana] gb|AAM6084 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccch-type zinc finger protein 0.0
N-terminus
biog2_v2.0_unigene3914 biogeco2 v2.0 896
• AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bzip transcription factor 0.0
N-terminus
biog2_v2.0_unigene3967 biogeco2 v2.0 498
• AutoFact: HLH domain containing protein 4.0e-13
• Blast2go: transcription factor bim1 0.0
Coding
biog2_v2.0_unigene3980 biogeco2 v2.0 1124
• AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
biog2_v2.0_unigene4197 biogeco2 v2.0 741
• AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
• FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: mads-box protein soc1-like 0.0
N-terminus
biog2_v2.0_unigene4284 biogeco2 v2.0 456
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
biog2_v2.0_unigene4293 biogeco2 v2.0 658
• AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zf-hd homeobox protein at4g24660-like 0.0
C-terminus
biog2_v2.0_unigene4379 biogeco2 v2.0 210
• AutoFact: MADS-box protein n=3 Tax=Pinaceae RepID=O04406_PINRA 0.0
• Blast2go: mads-box protein 0.0
unknown
biog2_v2.0_unigene4380 biogeco2 v2.0 427
• AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-17
• Blast2go: bzip transcription factor 0.0
unknown
biog2_v2.0_unigene4446 biogeco2 v2.0 469
• AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
C-terminus
biog2_v2.0_unigene4495 biogeco2 v2.0 409
• AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-23
• Blast2go: bzip transcription factor 1.00155e-23
unknown
biog2_v2.0_unigene4544 biogeco2 v2.0 546
• AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
• Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
unknown
biog2_v2.0_unigene4594 biogeco2 v2.0 1025
• AutoFact: MADS-box protein JOINTLESS (Fragment) n=1 Tax=Picea abies RepID=B2KZI9_PICAB 1.96182e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mads-box protein svp 0.0
Complete
biog2_v2.0_unigene4615 biogeco2 v2.0 879
• AutoFact: DRE-binding protein DREB1 n=1 Tax=Cymbidium insigne RepID=A6YT27_9ASPA 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dre-binding protein dreb1 0.0
C-terminus
biog2_v2.0_unigene4638 biogeco2 v2.0 1643
• AutoFact: zinc finger protein CONSTANS-LIKE 15 [Arabidopsis thaliana] sp|Q9C7E8.1|COL15_ARATH RecName: Full=Zinc finger protein CONSTANS-LIKE 15 gb|AAG51489.1|AC069471_20 CONSTANS family zinc finger protein, putative [Arabidopsis thaliana] gb|AAK59791.1| At1g28050/ 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (b-box type) family protein 0.0
C-terminus
biog2_v2.0_unigene4656 biogeco2 v2.0 1055
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
C-terminus
biog2_v2.0_unigene4727 biogeco2 v2.0 888
• AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit b-3 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain