Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene2773 biogeco2 v2.0 1016
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog2_v2.0_unigene2812 biogeco2 v2.0 245
• AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 4.0e-29
• Blast2go: catenin beta-1 4.68707e-39
Putative coding
biog2_v2.0_unigene2857 biogeco2 v2.0 1551
• AutoFact: EREBP-3 homolog n=2 Tax=Stylosanthes hamata RepID=Q9ZR83_STYHA 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 7.20587e-20
Putative N-terminus
biog2_v2.0_unigene2961 biogeco2 v2.0 529
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
• Blast2go: protein 0.0
Coding
biog2_v2.0_unigene2966 biogeco2 v2.0 736
• AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
• Blast2go: wrky transcription factor 0.0
unknown
biog2_v2.0_unigene2977 biogeco2 v2.0 869
• AutoFact: Myosin_tail_1 domain containing protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Complete
biog2_v2.0_unigene3037 biogeco2 v2.0 1275
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 3 0.0
Complete
biog2_v2.0_unigene3070 biogeco2 v2.0 625
• AutoFact: DDT; Homeodomain-related n=1 Tax=Medicago truncatula RepID=A2Q504_MEDTR 2.0e-13
• Blast2go: protein 4.19827e-13
unknown
biog2_v2.0_unigene3180 biogeco2 v2.0 701
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
C-terminus
biog2_v2.0_unigene3220 biogeco2 v2.0 854
• AutoFact: BZIP transcription factor n=2 Tax=core eudicotyledons RepID=Q93YM7_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: light-inducible protein cprf2-like 0.0
Putative C-terminus
biog2_v2.0_unigene3244 biogeco2 v2.0 496
• AutoFact: transcription factor CPC [Arabidopsis thaliana] sp|O22059.1|CPC_ARATH RecName: Full=Transcription factor CPC; AltName: Full=Protein CAPRICE dbj|BAA21917.1| CPC [Arabidopsis thaliana] gb|AAD23043.1| putative MYB family transcription factor [Arabidopsis tha 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caprice-like myb3 6.92368e-15
Complete
biog2_v2.0_unigene3397 biogeco2 v2.0 581
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
biog2_v2.0_unigene3407 biogeco2 v2.0 738
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c2-h2 zinc finger protein 0.0
Internal
biog2_v2.0_unigene3436 biogeco2 v2.0 1009
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative N-terminus
biog2_v2.0_unigene3492 biogeco2 v2.0 682
• AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone acetyltransferase 0.0
C-terminus
biog2_v2.0_unigene3521 biogeco2 v2.0 968
• AutoFact: Class III homeodomain leucine zipper protein n=18 Tax=Spermatophyta RepID=E7DX24_PICGL 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ31; Pinus taeda (Loblolly pine). 0.0
• Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
C-terminus
biog2_v2.0_unigene3533 biogeco2 v2.0 196
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
• Blast2go: high mobility group family 0.0
unknown
biog2_v2.0_unigene3564 biogeco2 v2.0 556
• AutoFact: Heat Shock Factor 3 [Arabidopsis thaliana] 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat stress transcription factor a-4a-like 2.43562e-16
Internal
biog2_v2.0_unigene3584 biogeco2 v2.0 385
• AutoFact: Heat shock factor protein HSF8, putative n=1 Tax=Ricinus communis RepID=B9SNT1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heat shock factor 0.0
Internal
biog2_v2.0_unigene3596 biogeco2 v2.0 587
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
• Blast2go: scarecrow-like protein 4-like 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain