Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene15481 biogeco2 v2.0 432
• AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15616 biogeco2 v2.0 248
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• Blast2go: protein 0.0
unknown
biog2_v2.0_unigene15628 biogeco2 v2.0 263
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
N-terminus
biog2_v2.0_unigene15645 biogeco2 v2.0 303
• AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor e2 dimerization partner protein 0.0
Internal
biog2_v2.0_unigene15750 biogeco2 v2.0 260
• AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 0.0
• Blast2go: protein 0.0
Coding
biog2_v2.0_unigene15798 biogeco2 v2.0 483
• AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene15806 biogeco2 v2.0 290
• AutoFact: Unassigned protein
• Blast2go: unknown [Picea sitchensis] 5.94001e-18
Putative coding
biog2_v2.0_unigene15929 biogeco2 v2.0 236
• AutoFact: Milkweed pod1 n=1 Tax=Zea mays RepID=B5LZ60_MAIZE 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rolled leaf 9 0.0
Internal
biog2_v2.0_unigene15939 biogeco2 v2.0 305
• AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 622 0.0
Putative C-terminus
biog2_v2.0_unigene15975 biogeco2 v2.0 265
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: global transcription factor group 0.0
Internal
biog2_v2.0_unigene15983 biogeco2 v2.0 345
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
biog2_v2.0_unigene16023 biogeco2 v2.0 490
• AutoFact: AG-motif binding protein-4 [Nicotiana tabacum] 8.0e-37
• Blast2go: gata binding protein 1 0.0
unknown
biog2_v2.0_unigene16060 biogeco2 v2.0 444
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] emb|CAB81804.1| putative protein [Arabidopsis thaliana] gb|AAM60968.1| unknown [Arabidopsis thaliana] gb|AAM98182.1| putative protein [Arabidopsis thaliana] gb|AAP13430.1| At3g54390 1.0e-06
• Blast2go: protein 2.66892e-10
Coding
biog2_v2.0_unigene16112 biogeco2 v2.0 399
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein phytoclock 1 0.0
Putative C-terminus
biog2_v2.0_unigene16132 biogeco2 v2.0 387
• AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ap2 domain-containing transcription factor 0.0
C-terminus
biog2_v2.0_unigene16255 biogeco2 v2.0 243
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
• FL-Next: sp=FACT complex subunit SSRP1; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
• Blast2go: fact complex subunit ssrp1 0.0
Internal
biog2_v2.0_unigene16456 biogeco2 v2.0 198
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• Blast2go: tubby-like f-box protein 3 0.0
unknown
biog2_v2.0_unigene16538 biogeco2 v2.0 68
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 6.0e-20
• Blast2go: protein 3.90149e-22
unknown
biog2_v2.0_unigene16550 biogeco2 v2.0 204
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
• Blast2go: sequence-specific dna binding transcription factor 0.0
unknown
biog2_v2.0_unigene16602 biogeco2 v2.0 569
• AutoFact: Unassigned protein
• FL-Next: sp=RAN GTPase-activating protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: nucleotide-binding oligomerization domain-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain