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Assembly Name: biogeco2 v2.0

Name: cytosol

Term: GO:0005829  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene91 biogeco2 v2.0 433
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TWM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene103 biogeco2 v2.0 489
AutoFact: DUF367 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable ribosome biogenesis protein c16orf42 homolog 0.0
C-terminus
biog2_v2.0_unigene112 biogeco2 v2.0 561
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
biog2_v2.0_unigene145 biogeco2 v2.0 333
AutoFact: calmodulin-binding transcription activator 4 [Arabidopsis thaliana] sp|Q9FYG2.1|CMTA4_ARATH RecName: Full=Calmodulin-binding transcription activator 4; AltName: Full=Ethylene-induced calmodulin-binding protein 4; Short=AtFIN21; Short=EICBP4; AltName: Full 0.0
FL-Next: sp=Calmodulin-binding transcription activator 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding transcription activator 4-like 0.0
C-terminus
biog2_v2.0_unigene196 biogeco2 v2.0 459
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDF7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yak1-like protein 1 0.0
C-terminus
biog2_v2.0_unigene235 biogeco2 v2.0 567
AutoFact: RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: seryl-trna synthetase 0.0
C-terminus
biog2_v2.0_unigene257 biogeco2 v2.0 363
AutoFact: Paramyosin, putative n=1 Tax=Ricinus communis RepID=B9R7C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog2_v2.0_unigene282 biogeco2 v2.0 421
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQ58_VITVI 0.0
Blast2go: neutral invertase-like protein 0.0
unknown
biog2_v2.0_unigene289 biogeco2 v2.0 652
AutoFact: Protein kinase [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase kappa 0.0
N-terminus
biog2_v2.0_unigene333 biogeco2 v2.0 620
AutoFact: Short-chain dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9SPD4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short-chain dehydrogenase reductase sdr 0.0
Internal
biog2_v2.0_unigene388 biogeco2 v2.0 523
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJW8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
N-terminus
biog2_v2.0_unigene400 biogeco2 v2.0 783
AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 3a subunit 3-like 0.0
N-terminus
biog2_v2.0_unigene418 biogeco2 v2.0 926
AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fha domain-containing protein ddl 0.0
Internal
biog2_v2.0_unigene419 biogeco2 v2.0 257
AutoFact: autophagy regulatory protein (ISS) [Ostreococcus tauri] emb|CAL51693.1| autophagy regulatory protein (ISS) [Ostreococcus tauri] 4.0e-26
Blast2go: protein autophagy 2 0.0
unknown
biog2_v2.0_unigene434 biogeco2 v2.0 821
AutoFact: phosphoglucosamine mutase [Carica papaya] 0.0
FL-Next: sp=Phosphoacetylglucosamine mutase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphoacetylglucosamine mutase 0.0
C-terminus
biog2_v2.0_unigene461 biogeco2 v2.0 738
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene489 biogeco2 v2.0 650
AutoFact: xylulose kinase-2 [Arabidopsis thaliana] gb|AAK92778.1| putative xylulose kinase [Arabidopsis thaliana] gb|AAN13165.1| putative xylulose kinase [Arabidopsis thaliana] gb|AED95841.1| xylulose kinase-2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: xylulose kinase 0.0
Internal
biog2_v2.0_unigene491 biogeco2 v2.0 702
AutoFact: ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_001031289.1| ACT domain-containing protein 3 [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing protein 3 0.0
Internal
biog2_v2.0_unigene527 biogeco2 v2.0 509
AutoFact: putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] emb|CAH09301.1| putative alpha-glucanotransferase [Bacteroides fragilis NCTC 9343] 0.0
FL-Next: sp=4-alpha-glucanotransferase DPE2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 4-alpha-glucanotransferase 0.0
Putative C-terminus
biog2_v2.0_unigene557 biogeco2 v2.0 266
AutoFact: male sterility 2 (MS2) protein [Arabidopsis thaliana] prf||1916413A male sterility 2 gene 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: fatty acyl- reductase 2 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain