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Assembly Name: biogeco2 v2.0

Name: cytosol

Term: GO:0005829  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene7255 biogeco2 v2.0 688
AutoFact: ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana] ref|NP_001031289.1| ACT domain-containing protein 3 [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act domain-containing protein 3 0.0
N-terminus
biog2_v2.0_unigene7307 biogeco2 v2.0 815
AutoFact: RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase emb|CAB11470.1| seryl-tRNA synthetase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: seryl-trna synthetase 0.0
N-terminus
biog2_v2.0_unigene7352 biogeco2 v2.0 1893
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
biog2_v2.0_unigene7465 biogeco2 v2.0 582
AutoFact: Sorting nexin-4, putative n=1 Tax=Ricinus communis RepID=B9RRH9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phox domain-containing protein 0.0
Internal
biog2_v2.0_unigene7474 biogeco2 v2.0 486
AutoFact: Peroxisome biogenesis protein 19-2 n=2 Tax=Arabidopsis RepID=PE192_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal protein pex19 family protein 0.0
C-terminus
biog2_v2.0_unigene7488 biogeco2 v2.0 589
AutoFact: DUF1777 multi-domain protein 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p30 dbc 0.0
C-terminus
biog2_v2.0_unigene7514 biogeco2 v2.0 603
AutoFact: Phosphoglycerate mutase, putative n=1 Tax=Ricinus communis RepID=B9RGZ7_RICCO 0.0
FL-Next: tr=At1g12850/F13K23_8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fructose- -bisphosphatase 0.0
C-terminus
biog2_v2.0_unigene7613 biogeco2 v2.0 814
AutoFact: Cyclin-dependent kinase G-2 n=4 Tax=Oryza sativa RepID=CDKG2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase g-2-like 0.0
Internal
biog2_v2.0_unigene7736 biogeco2 v2.0 597
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule-like 0.0
C-terminus
biog2_v2.0_unigene7773 biogeco2 v2.0 637
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: sp=Cell division control protein 48 homolog A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 48 homolog 0.0
Putative N-terminus
biog2_v2.0_unigene7790 biogeco2 v2.0 315
AutoFact: human Rev interacting-like protein-like [Oryza sativa Japonica Group] dbj|BAD25012.1| human Rev interacting-like protein-like [Oryza sativa Japonica Group] 0.0
Blast2go: arf-gap domain and fg repeats-containing protein 0.0
unknown
biog2_v2.0_unigene7825 biogeco2 v2.0 748
AutoFact: phosphoglucosamine mutase [Carica papaya] 0.0
FL-Next: sp=Phosphoacetylglucosamine mutase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: phosphoacetylglucosamine mutase 0.0
Internal
biog2_v2.0_unigene7954 biogeco2 v2.0 148
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
unknown
biog2_v2.0_unigene7983 biogeco2 v2.0 470
AutoFact: smad nuclear-interacting protein 1 [Arabidopsis thaliana] sp|Q8W4D8.1|DDL_ARATH RecName: Full=FHA domain-containing protein DDL; AltName: Full=Protein DAWDLE gb|AAL32704.1| Unknown protein [Arabidopsis thaliana] gb|AAN15324.1| Unknown protein [Arabidopsis 0.0
Blast2go: fha domain-containing protein ddl 0.0
unknown
biog2_v2.0_unigene8019 biogeco2 v2.0 565
AutoFact: putative pyridoxine biosynthesis protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamine amidotransferase subunit pdxt 0.0
C-terminus
biog2_v2.0_unigene8060 biogeco2 v2.0 545
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=3 Tax=core eudicotyledons RepID=D7SY66_VITVI 0.0
FL-Next: sp=Importin subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene8176 biogeco2 v2.0 594
AutoFact: DNA damage-inducible protein 1 [Arabidopsis thaliana] ref|NP_001189877.1| DNA damage-inducible protein 1 [Arabidopsis thaliana] gb|ABG25069.1| At3g13235 [Arabidopsis thaliana] dbj|BAE98897.1| hypothetical protein [Arabidopsis thaliana] gb|AEE75323.1| DNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna damage-inducible protein 1 0.0
N-terminus
biog2_v2.0_unigene8182 biogeco2 v2.0 367
AutoFact: UBX domain-containing protein [Arabidopsis thaliana] gb|AAK25974.1|AF360264_1 unknown protein [Arabidopsis thaliana] gb|AAN13184.1| unknown protein [Arabidopsis thaliana] gb|AEE84698.1| UBX domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubx domain-containing protein 0.0
N-terminus
biog2_v2.0_unigene8203 biogeco2 v2.0 472
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
N-terminus
biog2_v2.0_unigene8270 biogeco2 v2.0 564
AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
FL-Next: sp=Retinoblastoma-related protein 1; Pisum sativum (Garden pea). 0.0
Blast2go: retinoblastoma-related protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain