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Assembly Name: biogeco2 v2.0

Name: cytosol

Term: GO:0005829  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene1521 biogeco2 v2.0 500
AutoFact: BTB/POZ and M4 domain-containing protein [Arabidopsis thaliana] sp|Q9SRV1.1|BPM4_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 4; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 4; Short=AtBPM4 gb|AAF00643.1|AC009540_20 unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
C-terminus
biog2_v2.0_unigene1540 biogeco2 v2.0 668
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome regulatory subunit n2 0.0
Internal
biog2_v2.0_unigene1576 biogeco2 v2.0 373
AutoFact: Os12g0256300 protein n=6 Tax=Oryza sativa RepID=Q2QUQ9_ORYSJ 0.0
FL-Next: tr=Os11g0151600 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: pre-mrna-splicing factor cwc-22 0.0
Internal
biog2_v2.0_unigene1624 biogeco2 v2.0 729
AutoFact: Phloem calmodulin-like-domain protein kinase PCPK1 n=3 Tax=fabids RepID=Q8LPV9_CUCMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-dependent protein kinase 0.0
Putative Complete
biog2_v2.0_unigene1626 biogeco2 v2.0 1513
AutoFact: ATP citrate lyase, putative; 3734-7120 n=13 Tax=Magnoliophyta RepID=Q9C522_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-citrate synthase beta chain protein 1-like 0.0
N-terminus
biog2_v2.0_unigene1641 biogeco2 v2.0 850
AutoFact: Shaggy-related protein kinase epsilon [Arabidopsis thaliana] sp|Q8VZD5.1|KSG5_ARATH RecName: Full=Shaggy-related protein kinase epsilon; AltName: Full=ASK-epsilon gb|AAL57679.1| AT5g14640/T15N1_130 [Arabidopsis thaliana] gb|AAQ65089.1| At5g14640/T15N1_130 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene1692 biogeco2 v2.0 482
AutoFact: Beta-amylase n=1 Tax=Populus trichocarpa RepID=B9HKX1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene1711 biogeco2 v2.0 429
AutoFact: Beta-amylase n=1 Tax=Populus trichocarpa RepID=B9HKX1_POPTR 0.0
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene1774 biogeco2 v2.0 592
AutoFact: AMP deaminase [Arabidopsis thaliana] ref|NP_850294.1| AMP deaminase [Arabidopsis thaliana] sp|O80452.2|AMPD_ARATH RecName: Full=AMP deaminase; Short=AtAMPD; AltName: Full=Protein EMBRYONIC FACTOR 1 gb|AAL07150.1| putative AMP deaminase [Arabidopsis thalia 0.0
FL-Next: sp=AMP deaminase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: amp deaminase 0.0
C-terminus
biog2_v2.0_unigene1802 biogeco2 v2.0 2003
AutoFact: Heat shock 70 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9SQC9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 91 0.0
Putative N-terminus
biog2_v2.0_unigene1855 biogeco2 v2.0 458
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: atp-dependent helicase brm-like 0.0
C-terminus
biog2_v2.0_unigene1912 biogeco2 v2.0 338
AutoFact: Unassigned protein
FL-Next: sp=Geminivirus Rep-interacting motor protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: geminivirus rep-interacting motor 0.0
Internal
biog2_v2.0_unigene1930 biogeco2 v2.0 515
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9RRZ6_RICCO 0.0
FL-Next: tr=Receptor protein kinase CLAVATA1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: leucine rich repeat receptor protein kinase clavata1 0.0
Internal
biog2_v2.0_unigene1944 biogeco2 v2.0 1741
AutoFact: UVB-resistance protein UVR8 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rcc1 and btb domain-containing protein 0.0
Complete
biog2_v2.0_unigene1946 biogeco2 v2.0 1625
AutoFact: Aspartate aminotransferase n=1 Tax=Picea sitchensis RepID=A9NUJ0_PICSI 0.0
FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate aminotransferase 0.0
Complete
biog2_v2.0_unigene2010 biogeco2 v2.0 414
AutoFact: putative nuclear GTPase [Solanum lycopersicum] 0.0
Blast2go: guanine nucleotide-binding 3 homolog 0.0
unknown
biog2_v2.0_unigene2058 biogeco2 v2.0 552
AutoFact: putative ADP-ribosylation factor GTPase-activating protein AGD5 [Arabidopsis thaliana] sp|Q9FL69.1|AGD5_ARATH RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD5; Short=ARF GAP AGD5; AltName: Full=Protein ARF-GAP DOMAIN 5; Short= 0.0
Blast2go: probable adp-ribosylation factor gtpase-activating protein agd5-like 0.0
unknown
biog2_v2.0_unigene2069 biogeco2 v2.0 716
AutoFact: Exocyst complex component, putative n=1 Tax=Ricinus communis RepID=B9RAG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene2103 biogeco2 v2.0 892
AutoFact: xylulose kinase-2 [Arabidopsis thaliana] gb|AAK92778.1| putative xylulose kinase [Arabidopsis thaliana] gb|AAN13165.1| putative xylulose kinase [Arabidopsis thaliana] gb|AED95841.1| xylulose kinase-2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Xylulose kinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: xylulose kinase 0.0
C-terminus
biog2_v2.0_unigene2147 biogeco2 v2.0 574
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain