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Assembly Name: biogeco2 v2.0

Name: cytosol

Term: GO:0005829  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene17780 biogeco2 v2.0 138
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Internal
biog2_v2.0_unigene17816 biogeco2 v2.0 1268
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene17967 biogeco2 v2.0 84
AutoFact: protein ULTRAPETALA 1 [Arabidopsis thaliana] sp|Q8GZA8.1|ULT1_ARATH RecName: Full=Protein ULTRAPETALA 1 dbj|BAC41785.1| unknown protein [Arabidopsis thaliana] gb|ABH04520.1| At4g28190 [Arabidopsis thaliana] gb|AEE85451.1| protein ULTRAPETALA 1 [Arabidopsi 0.0
Blast2go: protein ultrapetala 1 0.0
unknown
biog2_v2.0_unigene17985 biogeco2 v2.0 258
AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: u3 small nucleolar ribonucleoprotein protein 0.0
N-terminus
biog2_v2.0_unigene18031 biogeco2 v2.0 678
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pre-mrna-splicing factor atp-dependent rna helicase-like 0.0
Putative C-terminus
biog2_v2.0_unigene18248 biogeco2 v2.0 308
AutoFact: Peroxisome biogenesis protein 19-2 n=2 Tax=Arabidopsis RepID=PE192_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal protein pex19 family protein 0.0
Internal
biog2_v2.0_unigene18292 biogeco2 v2.0 380
AutoFact: Receptor-like protein kinase n=2 Tax=Glycine max RepID=C6ZRW9_SOYBN 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase 0.0
Internal
biog2_v2.0_unigene18303 biogeco2 v2.0 666
AutoFact: Serine/threonine-protein phosphatase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S2C2_PHYPA 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase bsl3 0.0
Putative C-terminus
biog2_v2.0_unigene18379 biogeco2 v2.0 476
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18398 biogeco2 v2.0 532
AutoFact: U4/U6.U5 tri-snRNP-associated protein 3 [Arabidopsis thaliana] gb|AAK44048.1|AF370233_1 unknown protein [Arabidopsis thaliana] dbj|BAB08474.1| unnamed protein product [Arabidopsis thaliana] gb|AAM44976.1| unknown protein [Arabidopsis thaliana] gb|AED96893 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u4 small nuclear ribonucleoprotein 27 kda protein 7.89577e-37
N-terminus
biog2_v2.0_unigene18404 biogeco2 v2.0 491
AutoFact: putative nuclear GTPase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding 3 homolog 0.0
Internal
biog2_v2.0_unigene18425 biogeco2 v2.0 291
AutoFact: ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] gb|AEE86931.1| ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: act-like protein tyrosine kinase family protein 0.0
C-terminus
biog2_v2.0_unigene18555 biogeco2 v2.0 366
AutoFact: MAC/Perforin domain-containing protein [Arabidopsis thaliana] gb|AAG51760.1|AC068667_39 unknown protein; 124288-121737 [Arabidopsis thaliana] gb|AAL75908.1| At1g29690/F15D2_24 [Arabidopsis thaliana] gb|ABO38750.1| At1g29690 [Arabidopsis thaliana] gb|AEE31 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene18667 biogeco2 v2.0 783
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
C-terminus
biog2_v2.0_unigene18720 biogeco2 v2.0 739
AutoFact: Stress responsive alpha-beta barrel domain protein [Arabidopsis thaliana] gb|AAD24844.1| unknown protein [Arabidopsis thaliana] gb|AAR24683.1| At2g31670 [Arabidopsis thaliana] gb|AAR25640.1| At2g31670 [Arabidopsis thaliana] gb|AEC08571.1| Stress responsiv 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stress responsive alpha-beta barrel domain protein 0.0
C-terminus
biog2_v2.0_unigene18740 biogeco2 v2.0 714
AutoFact: Oligopeptidase A, putative n=1 Tax=Ricinus communis RepID=B9SMK4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: oligopeptidase a 0.0
Internal
biog2_v2.0_unigene18761 biogeco2 v2.0 556
AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 1-like 0.0
Internal
biog2_v2.0_unigene18840 biogeco2 v2.0 598
AutoFact: NAD(H) kinase 3 [Arabidopsis thaliana] sp|Q500Y9.1|NADHK_ARATH RecName: Full=NADH kinase; Short=AtNADK-3 gb|AAY27065.1| At1g78590 [Arabidopsis thaliana] gb|ACF28397.1| At1g78590 [Arabidopsis thaliana] gb|AEE36124.1| NAD(H) kinase 3 [Arabidopsis thaliana] 0.0
FL-Next: sp=NADH kinase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nadh kinase-like 0.0
N-terminus
biog2_v2.0_unigene18926 biogeco2 v2.0 462
AutoFact: Heat shock protein 90-1 n=9 Tax=rosids RepID=HS901_ARATH 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 kda 2.56541e-28
Putative C-terminus
biog2_v2.0_unigene18940 biogeco2 v2.0 43
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
Blast2go: elongation factor ef-2 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain