Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog2_v2.0_unigene3037 biogeco2 v2.0 1275
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 3 0.0
Complete
biog2_v2.0_unigene3120 biogeco2 v2.0 580
• AutoFact: Arf gtpase-activating protein, putative n=1 Tax=Ricinus communis RepID=B9SNV8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable adp-ribosylation factor gtpase-activating protein agd8-like 0.0
N-terminus
biog2_v2.0_unigene3122 biogeco2 v2.0 1088
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog2_v2.0_unigene3182 biogeco2 v2.0 534
• AutoFact: MYB transcription factor [Triticum aestivum] 0.0
• Blast2go: myb transcription factor 0.0
Coding
biog2_v2.0_unigene3189 biogeco2 v2.0 838
• AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative Complete
biog2_v2.0_unigene3213 biogeco2 v2.0 584
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SLJ7_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene3244 biogeco2 v2.0 496
• AutoFact: transcription factor CPC [Arabidopsis thaliana] sp|O22059.1|CPC_ARATH RecName: Full=Transcription factor CPC; AltName: Full=Protein CAPRICE dbj|BAA21917.1| CPC [Arabidopsis thaliana] gb|AAD23043.1| putative MYB family transcription factor [Arabidopsis tha 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: caprice-like myb3 6.92368e-15
Complete
biog2_v2.0_unigene3288 biogeco2 v2.0 444
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog2_v2.0_unigene3533 biogeco2 v2.0 196
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
• Blast2go: high mobility group family 0.0
unknown
biog2_v2.0_unigene3579 biogeco2 v2.0 463
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
• Blast2go: atp-dependent helicase brm-like 0.0
Internal
biog2_v2.0_unigene3625 biogeco2 v2.0 1386
• AutoFact: MYB-like transcriptional factor MBF1 n=1 Tax=Picea mariana RepID=Q40920_PICMA 0.0
• FL-Next: tr=MYB-like transcriptional factor MBF1; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: myb transcription factor myb92 0.0
Complete
biog2_v2.0_unigene3651 biogeco2 v2.0 372
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: myb-cc type transfactor 0.0
N-terminus
biog2_v2.0_unigene3785 biogeco2 v2.0 384
• AutoFact: CDC5 protein n=3 Tax=Andropogoneae RepID=Q8W149_MAIZE 6.0e-27
• Blast2go: myb transcription factor 4.49929e-33
unknown
biog2_v2.0_unigene3809 biogeco2 v2.0 266
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeodomain protein 0.0
C-terminus
biog2_v2.0_unigene3817 biogeco2 v2.0 604
• AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
• FL-Next: sp=Heat stress transcription factor B-2b; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: heat shock factor protein 7 0.0
Internal
biog2_v2.0_unigene3923 biogeco2 v2.0 391
• AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
• Blast2go: f-box family protein 3.1703e-41
unknown
biog2_v2.0_unigene4257 biogeco2 v2.0 394
• AutoFact: NAC, putative [Arabidopsis thaliana] 0.0
• Blast2go: nac domain ipr003441 0.0
unknown
biog2_v2.0_unigene4293 biogeco2 v2.0 658
• AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zf-hd homeobox protein at4g24660-like 0.0
C-terminus
biog2_v2.0_unigene4298 biogeco2 v2.0 959
• AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
• FL-Next: sp=Floricaula/leafy-like protein FL1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: needly-like protein 0.0
N-terminus
biog2_v2.0_unigene4310 biogeco2 v2.0 812
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2b 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain