Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene10319 biogeco2 v2.0 286
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
biog2_v2.0_unigene10345 biogeco2 v2.0 529
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
biog2_v2.0_unigene10439 biogeco2 v2.0 415
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
biog2_v2.0_unigene10440 biogeco2 v2.0 564
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 1.27339e-34
Internal
biog2_v2.0_unigene10488 biogeco2 v2.0 469
AutoFact: putative multiple stress-responsive zinc-finger protein [Citrus hybrid cultivar] 2.99878e-43
Blast2go: protein 0.0
unknown
biog2_v2.0_unigene10496 biogeco2 v2.0 273
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: minichromosome maintenance protein 0.0
Internal
biog2_v2.0_unigene10544 biogeco2 v2.0 648
AutoFact: R2R3-MYB transcription factor MYB5 n=1 Tax=Picea glauca RepID=A5JYE9_PICGL 0.0
Blast2go: myb-like protein 0.0
Putative coding
biog2_v2.0_unigene10599 biogeco2 v2.0 419
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
C-terminus
biog2_v2.0_unigene10649 biogeco2 v2.0 329
AutoFact: MYB transcription factor MYB172 n=1 Tax=Glycine max RepID=Q0PJF6_SOYBN 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 3.06115e-19
Putative N-terminus
biog2_v2.0_unigene10652 biogeco2 v2.0 371
AutoFact: Ethylene-responsive transcription factor TINY n=1 Tax=Arabidopsis thaliana RepID=TINY_ARATH 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor tiny 1.95438e-17
Internal
biog2_v2.0_unigene10673 biogeco2 v2.0 297
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein Sb05g025690; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
biog2_v2.0_unigene10697 biogeco2 v2.0 978
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
FL-Next: tr=DNA replication licensing factor MCM2, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: minichromosome maintenance protein 2 0.0
N-terminus
biog2_v2.0_unigene10784 biogeco2 v2.0 191
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: minichromosome maintenance protein 2 0.0
Internal
biog2_v2.0_unigene10814 biogeco2 v2.0 244
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
Blast2go: flap endonuclease 1a 0.0
unknown
biog2_v2.0_unigene10856 biogeco2 v2.0 272
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Internal
biog2_v2.0_unigene10898 biogeco2 v2.0 504
AutoFact: Myb-related transcription factor n=1 Tax=Solanum lycopersicum RepID=Q40173_SOLLC 0.0
Blast2go: myb-related transcription factor 0.0
Putative coding
biog2_v2.0_unigene10986 biogeco2 v2.0 213
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
N-terminus
biog2_v2.0_unigene10994 biogeco2 v2.0 503
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
Blast2go: arid bright dna-binding domain-containing protein 1.68156e-44
unknown
biog2_v2.0_unigene11040 biogeco2 v2.0 277
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
biog2_v2.0_unigene11070 biogeco2 v2.0 330
AutoFact: ATP-dependent helicase BRM [Arabidopsis thaliana] sp|Q6EVK6.1|BRM_ARATH RecName: Full=ATP-dependent helicase BRM; Short=AtBRM; AltName: Full=Protein BRAHMA emb|CAG28313.1| putative SNF2 subfamily ATPase [Arabidopsis thaliana] gb|AEC10632.1| ATP-dependent 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase brm 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain