Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene16 biogeco2 v2.0 807
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog2_v2.0_unigene158 biogeco2 v2.0 414
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB75799.1| hypothetical protein [Arabidopsis thaliana] gb|AAY25452.1| At3g59800 [Arabidopsis thaliana] gb|AEE79970.1| uncharacterized protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
biog2_v2.0_unigene162 biogeco2 v2.0 531
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
Internal
biog2_v2.0_unigene182 biogeco2 v2.0 491
AutoFact: glyoxal oxidase-related protein [Arabidopsis thaliana] gb|AAF43943.1|AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb|L47287 [Arabidopsis thaliana] gb|AEE29162.1| glyoxal oxidase-related protein [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: galactose oxidase-like 0.0
Internal
biog2_v2.0_unigene301 biogeco2 v2.0 685
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein binding 0.0
Complete
biog2_v2.0_unigene461 biogeco2 v2.0 738
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene707 biogeco2 v2.0 514
AutoFact: chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gb|AAM13842.1| unknown protein [Arabidopsis thaliana] gb|AAM91748.1| unknown protein [Arabidopsis thaliana] gb|AEE34881.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] 7.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: heat shock protein binding protein 0.0
Internal
biog2_v2.0_unigene759 biogeco2 v2.0 636
AutoFact: metal ion binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene1483 biogeco2 v2.0 739
AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: seuss transcriptional co-regulator 0.0
C-terminus
biog2_v2.0_unigene1535 biogeco2 v2.0 619
AutoFact: GPI transamidase component PIG-S-related protein [Arabidopsis thaliana] gb|AAL32707.1| Unknown protein [Arabidopsis thaliana] gb|AAM91117.1| unknown protein [Arabidopsis thaliana] gb|AEE74508.1| GPI transamidase component PIG-S-related protein [Arabidopsi 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gpi transamidase component pig-s-like 0.0
Internal
biog2_v2.0_unigene1612 biogeco2 v2.0 649
AutoFact: Pre-mRNA splicing factor [Solanum tuberosum] 1.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100246698 5.7585e-19
Internal
biog2_v2.0_unigene1808 biogeco2 v2.0 484
AutoFact: vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] dbj|BAD19586.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: calcium-dependent lipid-binding-like partial 0.0
C-terminus
biog2_v2.0_unigene1840 biogeco2 v2.0 692
AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Internal
biog2_v2.0_unigene2890 biogeco2 v2.0 373
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 5.0e-36
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene2911 biogeco2 v2.0 440
AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: pre-mrna-splicing factor clf1 0.0
Internal
biog2_v2.0_unigene3045 biogeco2 v2.0 738
AutoFact: tRNA, putative n=1 Tax=Ricinus communis RepID=B9S623_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: trna (adenine-n1-)-methyltransferase 0.0
C-terminus
biog2_v2.0_unigene3131 biogeco2 v2.0 550
AutoFact: Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain [Arabidopsis thaliana] gb|AEE27246.1| Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain [Arabidopsis thaliana] 4.0e-12
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.12643e-26
C-terminus
biog2_v2.0_unigene3231 biogeco2 v2.0 364
AutoFact: DUF2361 multi-domain protein 1.0e-37
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
biog2_v2.0_unigene3597 biogeco2 v2.0 630
AutoFact: Myosin_tail_1 multi-domain protein 8.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene3650 biogeco2 v2.0 502
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain